Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PFDN1O60925 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
PFDN1O60925 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PFDN1O60925 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
PFDN1O60925 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.64■□□□□ 0.42
PFDN1O60925 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PFDN1O60925 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PFDN1O60925 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PFDN1O60925 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PFDN1O60925 LINC01529-204ENST00000636474 1715 ntBASIC17.64■□□□□ 0.41
PFDN1O60925 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PFDN1O60925 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.64■□□□□ 0.41
PFDN1O60925 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.64■□□□□ 0.41
PFDN1O60925 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 TMEM179-206ENST00000616017 1645 ntBASIC17.64■□□□□ 0.41
PFDN1O60925 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PFDN1O60925 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PFDN1O60925 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.63■□□□□ 0.41
PFDN1O60925 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.63■□□□□ 0.41
PFDN1O60925 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.63■□□□□ 0.41
PFDN1O60925 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 RP9P-202ENST00000450133 1212 ntBASIC17.63■□□□□ 0.41
PFDN1O60925 AC009086.3-201ENST00000623486 1008 ntBASIC17.63■□□□□ 0.41
PFDN1O60925 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PFDN1O60925 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PFDN1O60925 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PFDN1O60925 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.62■□□□□ 0.41
PFDN1O60925 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.62■□□□□ 0.41
PFDN1O60925 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PFDN1O60925 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PFDN1O60925 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.62■□□□□ 0.41
PFDN1O60925 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PFDN1O60925 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PFDN1O60925 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.62■□□□□ 0.41
PFDN1O60925 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.62■□□□□ 0.41
PFDN1O60925 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PFDN1O60925 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.61■□□□□ 0.41
PFDN1O60925 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.61■□□□□ 0.41
PFDN1O60925 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PFDN1O60925 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.61■□□□□ 0.41
PFDN1O60925 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PFDN1O60925 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.61■□□□□ 0.41
PFDN1O60925 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PFDN1O60925 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.61■□□□□ 0.41
PFDN1O60925 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PFDN1O60925 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN1O60925 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN1O60925 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.61■□□□□ 0.41
PFDN1O60925 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms