Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF11O60813 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20■□□□□ 0.79
PRAMEF11O60813 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF11O60813 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20■□□□□ 0.79
PRAMEF11O60813 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF11O60813 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20■□□□□ 0.79
PRAMEF11O60813 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 AC125437.2-201ENST00000625180 2167 ntBASIC20■□□□□ 0.79
PRAMEF11O60813 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF11O60813 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 AL158047.1-201ENST00000445918 881 ntBASIC19.99■□□□□ 0.79
PRAMEF11O60813 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 AC004264.1-201ENST00000608354 794 ntBASIC19.99■□□□□ 0.79
PRAMEF11O60813 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF11O60813 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF11O60813 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
PRAMEF11O60813 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
PRAMEF11O60813 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEF11O60813 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PRAMEF11O60813 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.98■□□□□ 0.79
PRAMEF11O60813 FAM197Y4-202ENST00000622692 608 ntBASIC19.98■□□□□ 0.79
PRAMEF11O60813 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF11O60813 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 KRT16P5-201ENST00000455284 522 ntBASIC19.97■□□□□ 0.79
PRAMEF11O60813 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF11O60813 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF11O60813 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF11O60813 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF11O60813 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PRAMEF11O60813 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF11O60813 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF11O60813 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.96■□□□□ 0.79
PRAMEF11O60813 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.96■□□□□ 0.79
PRAMEF11O60813 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF11O60813 TUBB8P6-201ENST00000436895 1288 ntBASIC19.96■□□□□ 0.79
PRAMEF11O60813 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PRAMEF11O60813 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.96■□□□□ 0.79
PRAMEF11O60813 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PRAMEF11O60813 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms