Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CTNND1O60716 ATP5G1P1-201ENST00000448724 379 ntBASIC23.04■■□□□ 1.28
CTNND1O60716 NTF6B-201ENST00000591913 560 ntBASIC23.04■■□□□ 1.28
CTNND1O60716 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTNND1O60716 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTNND1O60716 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTNND1O60716 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTNND1O60716 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CTNND1O60716 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CTNND1O60716 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.03■■□□□ 1.28
CTNND1O60716 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.03■■□□□ 1.28
CTNND1O60716 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.03■■□□□ 1.28
CTNND1O60716 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.03■■□□□ 1.28
CTNND1O60716 SLC25A1P4-201ENST00000567977 778 ntBASIC23.03■■□□□ 1.28
CTNND1O60716 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.03■■□□□ 1.28
CTNND1O60716 AC011298.2-201ENST00000617989 482 ntBASIC23.03■■□□□ 1.28
CTNND1O60716 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CTNND1O60716 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.03■■□□□ 1.28
CTNND1O60716 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.03■■□□□ 1.28
CTNND1O60716 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.02■■□□□ 1.28
CTNND1O60716 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.02■■□□□ 1.28
CTNND1O60716 AC008040.2-201ENST00000461049 708 ntBASIC23.02■■□□□ 1.28
CTNND1O60716 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CTNND1O60716 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CTNND1O60716 FAM87A-204ENST00000613235 858 ntBASIC23.02■■□□□ 1.28
CTNND1O60716 AC006011.2-201ENST00000621313 1158 ntBASIC23.02■■□□□ 1.28
CTNND1O60716 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.02■■□□□ 1.28
CTNND1O60716 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CTNND1O60716 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.02■■□□□ 1.28
CTNND1O60716 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CTNND1O60716 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CTNND1O60716 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.01■■□□□ 1.27
CTNND1O60716 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 INGX-201ENST00000359239 846 ntBASIC23.01■■□□□ 1.27
CTNND1O60716 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 AC004951.3-201ENST00000418645 1148 ntBASIC23.01■■□□□ 1.27
CTNND1O60716 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.01■■□□□ 1.27
CTNND1O60716 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.01■■□□□ 1.27
CTNND1O60716 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.01■■□□□ 1.27
CTNND1O60716 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CTNND1O60716 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CTNND1O60716 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.01■■□□□ 1.27
CTNND1O60716 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23■■□□□ 1.27
CTNND1O60716 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CTNND1O60716 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23■■□□□ 1.27
CTNND1O60716 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23■■□□□ 1.27
CTNND1O60716 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23■■□□□ 1.27
CTNND1O60716 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23■■□□□ 1.27
CTNND1O60716 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CTNND1O60716 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CTNND1O60716 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23■■□□□ 1.27
CTNND1O60716 TMEM179-206ENST00000616017 1645 ntBASIC23■■□□□ 1.27
CTNND1O60716 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 SMG8-203ENST00000578922 2178 ntBASIC23■■□□□ 1.27
CTNND1O60716 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23■■□□□ 1.27
CTNND1O60716 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23■■□□□ 1.27
CTNND1O60716 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CTNND1O60716 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.99■■□□□ 1.27
CTNND1O60716 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CTNND1O60716 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CTNND1O60716 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CTNND1O60716 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.99■■□□□ 1.27
CTNND1O60716 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CTNND1O60716 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CTNND1O60716 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms