Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSX5O60225 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX5O60225 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX5O60225 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX5O60225 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SSX5O60225 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SSX5O60225 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.82■□□□□ 0.28
SSX5O60225 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 AC027612.3-201ENST00000413684 1047 ntBASIC16.82■□□□□ 0.28
SSX5O60225 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.82■□□□□ 0.28
SSX5O60225 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
SSX5O60225 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX5O60225 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SSX5O60225 AL032819.2-201ENST00000624543 2162 ntBASIC16.81■□□□□ 0.28
SSX5O60225 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.81■□□□□ 0.28
SSX5O60225 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX5O60225 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX5O60225 SLC7A5P1-201ENST00000568957 537 ntBASIC16.81■□□□□ 0.28
SSX5O60225 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX5O60225 AL356652.1-201ENST00000615962 565 ntBASIC16.81■□□□□ 0.28
SSX5O60225 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX5O60225 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX5O60225 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SSX5O60225 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SSX5O60225 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX5O60225 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX5O60225 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX5O60225 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SSX5O60225 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 LINC02228-203ENST00000641970 1355 ntBASIC16.8■□□□□ 0.28
SSX5O60225 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 AC019069.1-201ENST00000610008 1333 ntBASIC16.8■□□□□ 0.28
SSX5O60225 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SSX5O60225 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX5O60225 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX5O60225 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.8■□□□□ 0.28
SSX5O60225 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.8■□□□□ 0.28
SSX5O60225 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX5O60225 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX5O60225 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX5O60225 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX5O60225 FZD10-202ENST00000539839 3282 ntBASIC16.8■□□□□ 0.28
SSX5O60225 AC087633.2-202ENST00000565166 1439 ntBASIC16.79■□□□□ 0.28
SSX5O60225 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX5O60225 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX5O60225 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX5O60225 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX5O60225 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX5O60225 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SSX5O60225 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms