Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 AL158211.5-201ENST00000623583 2518 ntBASIC17.55■□□□□ 0.4
TRAF3IP2O43734 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 AP003097.1-201ENST00000530657 1135 ntBASIC17.54■□□□□ 0.4
TRAF3IP2O43734 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP2O43734 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 POM121L13P-201ENST00000422362 380 ntBASIC17.53■□□□□ 0.4
TRAF3IP2O43734 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAF3IP2O43734 AC138932.1-201ENST00000534164 6830 ntBASIC17.52■□□□□ 0.4
TRAF3IP2O43734 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 AL121829.2-201ENST00000620908 328 ntBASIC17.52■□□□□ 0.4
TRAF3IP2O43734 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAF3IP2O43734 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAF3IP2O43734 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms