Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDH17O14917 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDH17O14917 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDH17O14917 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 MIR718-201ENST00000390190 70 ntBASIC18.77■□□□□ 0.6
PCDH17O14917 AL596275.1-201ENST00000423464 877 ntBASIC18.77■□□□□ 0.6
PCDH17O14917 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 C1QBPP2-201ENST00000528754 825 ntBASIC18.77■□□□□ 0.6
PCDH17O14917 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDH17O14917 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDH17O14917 MTDHP1-201ENST00000605323 784 ntBASIC18.77■□□□□ 0.6
PCDH17O14917 AC006557.6-201ENST00000623071 864 ntBASIC18.77■□□□□ 0.6
PCDH17O14917 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH17O14917 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH17O14917 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDH17O14917 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH17O14917 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH17O14917 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDH17O14917 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH17O14917 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDH17O14917 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH17O14917 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH17O14917 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH17O14917 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH17O14917 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH17O14917 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 KRT8P20-201ENST00000423953 1409 ntBASIC18.76■□□□□ 0.59
PCDH17O14917 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH17O14917 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH17O14917 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDH17O14917 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH17O14917 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH17O14917 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.76■□□□□ 0.59
PCDH17O14917 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH17O14917 SMG8-203ENST00000578922 2178 ntBASIC18.76■□□□□ 0.59
PCDH17O14917 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH17O14917 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH17O14917 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH17O14917 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH17O14917 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH17O14917 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PCDH17O14917 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDH17O14917 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH17O14917 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH17O14917 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH17O14917 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH17O14917 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 AL031963.3-201ENST00000606441 850 ntBASIC18.75■□□□□ 0.59
PCDH17O14917 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH17O14917 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH17O14917 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH17O14917 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH17O14917 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH17O14917 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDH17O14917 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH17O14917 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH17O14917 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms