Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CHD2O14647 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 STARP1-201ENST00000397973 869 ntBASIC27.55■■■□□ 2
CHD2O14647 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC27.55■■■□□ 2
CHD2O14647 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC27.55■■■□□ 2
CHD2O14647 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
CHD2O14647 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC27.55■■■□□ 2
CHD2O14647 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC27.55■■■□□ 2
CHD2O14647 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC27.55■■■□□ 2
CHD2O14647 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC27.55■■■□□ 2
CHD2O14647 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC27.55■■■□□ 2
CHD2O14647 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
CHD2O14647 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHD2O14647 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC27.55■■■□□ 2
CHD2O14647 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC27.55■■■□□ 2
CHD2O14647 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.55■■■□□ 2
CHD2O14647 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC27.54■■■□□ 2
CHD2O14647 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 DPP3P2-201ENST00000416030 1696 ntBASIC27.54■■■□□ 2
CHD2O14647 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
CHD2O14647 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 SNX5-210ENST00000481323 562 ntTSL 3 BASIC27.54■■■□□ 2
CHD2O14647 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC27.54■■■□□ 2
CHD2O14647 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC27.54■■■□□ 2
CHD2O14647 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC27.54■■■□□ 2
CHD2O14647 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC27.54■■■□□ 2
CHD2O14647 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
CHD2O14647 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 AL031432.5-201ENST00000641059 760 ntBASIC27.54■■■□□ 2
CHD2O14647 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD2O14647 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 SPDYE15P-201ENST00000424157 909 ntBASIC27.53■■■□□ 2
CHD2O14647 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC27.53■■■□□ 2
CHD2O14647 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC27.53■■■□□ 2
CHD2O14647 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC27.53■■■□□ 2
CHD2O14647 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 AL691432.3-201ENST00000621860 400 ntBASIC27.53■■■□□ 2
CHD2O14647 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD2O14647 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.52■■■□□ 2
CHD2O14647 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
CHD2O14647 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 KRT8P10-201ENST00000450021 1447 ntBASIC27.52■■■□□ 2
CHD2O14647 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC27.52■■■□□ 2
CHD2O14647 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC27.52■■■□□ 2
CHD2O14647 TMEM179-206ENST00000616017 1645 ntBASIC27.52■■■□□ 2
CHD2O14647 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD2O14647 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD2O14647 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC27.51■■□□□ 1.99
CHD2O14647 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CHD2O14647 FDX1P1-201ENST00000449115 551 ntBASIC27.51■■□□□ 1.99
CHD2O14647 NEK4P2-201ENST00000580004 1012 ntBASIC27.51■■□□□ 1.99
CHD2O14647 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC27.51■■□□□ 1.99
CHD2O14647 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC27.51■■□□□ 1.99
CHD2O14647 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC27.51■■□□□ 1.99
CHD2O14647 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
CHD2O14647 KRT8P8-201ENST00000434750 1448 ntBASIC27.51■■□□□ 1.99
CHD2O14647 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD2O14647 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD2O14647 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD2O14647 NT5C-210ENST00000582160 860 ntTSL 2 BASIC27.51■■□□□ 1.99
CHD2O14647 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC27.51■■□□□ 1.99
CHD2O14647 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD2O14647 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CHD2O14647 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC27.5■■□□□ 1.99
CHD2O14647 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD2O14647 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD2O14647 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD2O14647 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CHD2O14647 AC233723.2-201ENST00000623798 2106 ntBASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms