Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 PTBP1P-201ENST00000554374 1601 ntBASIC18.38■□□□□ 0.53
AP3D1O14617 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3D1O14617 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3D1O14617 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
AP3D1O14617 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.37■□□□□ 0.53
AP3D1O14617 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP3D1O14617 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 AC018445.3-201ENST00000624177 1945 ntBASIC18.37■□□□□ 0.53
AP3D1O14617 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3D1O14617 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3D1O14617 AL158211.5-201ENST00000623583 2518 ntBASIC18.37■□□□□ 0.53
AP3D1O14617 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3D1O14617 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
AP3D1O14617 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AP3D1O14617 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
AP3D1O14617 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.36■□□□□ 0.53
AP3D1O14617 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.36■□□□□ 0.53
AP3D1O14617 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.36■□□□□ 0.53
AP3D1O14617 AF201337.1-201ENST00000520239 748 ntBASIC18.36■□□□□ 0.53
AP3D1O14617 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3D1O14617 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.36■□□□□ 0.53
AP3D1O14617 AC092666.2-201ENST00000613287 246 ntBASIC18.36■□□□□ 0.53
AP3D1O14617 AL589743.5-201ENST00000616611 1050 ntBASIC18.36■□□□□ 0.53
AP3D1O14617 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 MKRN4P-201ENST00000444706 1521 ntBASIC18.35■□□□□ 0.53
AP3D1O14617 KRT16P6-202ENST00000425692 1426 ntBASIC18.35■□□□□ 0.53
AP3D1O14617 KRT8P17-201ENST00000453110 1448 ntBASIC18.35■□□□□ 0.53
AP3D1O14617 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.35■□□□□ 0.53
AP3D1O14617 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.35■□□□□ 0.53
AP3D1O14617 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.35■□□□□ 0.53
AP3D1O14617 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
AP3D1O14617 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
AP3D1O14617 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3D1O14617 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3D1O14617 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3D1O14617 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
AP3D1O14617 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
AP3D1O14617 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3D1O14617 AC006970.2-201ENST00000450065 779 ntBASIC18.34■□□□□ 0.53
AP3D1O14617 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3D1O14617 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3D1O14617 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms