Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.06■■□□□ 1.12
SPDYE4A6NLX3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 AC073648.6-201ENST00000641589 218 ntBASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
SPDYE4A6NLX3 AC003102.1-202ENST00000563394 1796 ntBASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 AC027702.1-201ENST00000563810 1770 ntBASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPDYE4A6NLX3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 KRT17P1-201ENST00000399211 1546 ntBASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 FAM197Y4-202ENST00000622692 608 ntBASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 AC120498.9-201ENST00000339021 3867 ntBASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDYE4A6NLX3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 ADAM3B-201ENST00000569937 840 ntBASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 MIR3908-201ENST00000579798 126 ntBASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDYE4A6NLX3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
SPDYE4A6NLX3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SPDYE4A6NLX3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.01■■□□□ 1.11
SPDYE4A6NLX3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms