Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 AC010947.1-201ENST00000623454 693 ntBASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 AC092865.7-201ENST00000641832 219 ntBASIC20■□□□□ 0.79
TBC1D3BA6NDS4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3BA6NDS4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 AC005521.1-201ENST00000393351 872 ntBASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 MESTP1-201ENST00000404287 994 ntBASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 AC004980.1-204ENST00000429707 299 ntBASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 CLDN5-201ENST00000403084 2357 ntBASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TBC1D3BA6NDS4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 AC011506.1-201ENST00000474329 610 ntBASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TBC1D3BA6NDS4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 AL137013.1-201ENST00000432946 1228 ntBASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TBC1D3BA6NDS4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms