Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT1A5YKK6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 AL160237.2-201ENST00000556165 472 ntBASIC18.86■□□□□ 0.61
CNOT1A5YKK6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 AC018553.1-201ENST00000616682 1458 ntBASIC18.86■□□□□ 0.61
CNOT1A5YKK6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CNOT1A5YKK6 HBZP1-201ENST00000354915 429 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 CA15P1-201ENST00000481698 905 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 ZNF444P1-201ENST00000559497 298 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 AP000523.1-201ENST00000398242 1049 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 AL353719.1-201ENST00000566847 864 ntBASIC18.85■□□□□ 0.61
CNOT1A5YKK6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CNOT1A5YKK6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 MIR2861-201ENST00000636310 90 ntBASIC18.84■□□□□ 0.61
CNOT1A5YKK6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 AP002383.4-201ENST00000442518 975 ntBASIC18.84■□□□□ 0.61
CNOT1A5YKK6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 AP002469.2-201ENST00000531724 424 ntBASIC18.84■□□□□ 0.61
CNOT1A5YKK6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT1A5YKK6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT1A5YKK6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT1A5YKK6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT1A5YKK6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms