Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS13CQ709C8 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 PARN-201ENST00000341484 2100 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS13CQ709C8 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AL359715.3-201ENST00000569267 2123 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 MAK-202ENST00000354489 3941 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 MIR1193-201ENST00000408109 78 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 LINC01881-201ENST00000416103 412 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AP006289.1-201ENST00000538089 277 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC068724.3-201ENST00000625906 87 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AL672138.1-201ENST00000450604 1015 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 SS18L2P2-201ENST00000583960 235 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 AL513327.3-201ENST00000602618 469 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC100871.1-201ENST00000507871 1456 ntBASIC4.41□□□□□ -1.7
VPS13CQ709C8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
VPS13CQ709C8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 RN7SKP227-201ENST00000364445 330 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS13CQ709C8 RPS4XP9-201ENST00000405151 780 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC007562.1-201ENST00000421819 517 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 RPL12P28-201ENST00000430852 489 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 RPL5P25-201ENST00000441148 775 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC023274.2-201ENST00000445264 521 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC109635.6-201ENST00000525487 1113 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 AL161637.1-201ENST00000622380 412 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS13CQ709C8 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS13CQ709C8 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS13CQ709C8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 RBMY2TP-201ENST00000451162 947 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC026402.1-201ENST00000513642 170 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 RN7SKP92-201ENST00000517266 244 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 AC233699.1-201ENST00000569955 1168 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.4□□□□□ -1.7
VPS13CQ709C8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS13CQ709C8 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS13CQ709C8 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS13CQ709C8 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS13CQ709C8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 RNA5SP455-201ENST00000365190 119 ntBASIC4.4□□□□□ -1.71
VPS13CQ709C8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 AC063943.1-201ENST00000465434 453 ntBASIC4.4□□□□□ -1.71
VPS13CQ709C8 AC109327.1-201ENST00000471666 403 ntBASIC4.4□□□□□ -1.71
VPS13CQ709C8 COX6B1P5-201ENST00000509843 249 ntBASIC4.4□□□□□ -1.71
VPS13CQ709C8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.4□□□□□ -1.71
VPS13CQ709C8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms