Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MFSD8-220ENST00000641243 1422 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 CHEK2P3-201ENST00000416118 248 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKDCP78527 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.86□□□□□ -1.79
PRKDCP78527 RN7SKP288-201ENST00000516227 268 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 AP001880.2-201ENST00000538233 448 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 AC007996.1-201ENST00000620414 2821 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 CYP1D1P-201ENST00000416662 1433 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 AC013268.3-201ENST00000262716 2324 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKDCP78527 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKDCP78527 RNU1-45P-201ENST00000517191 141 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 TEK-204ENST00000519097 3836 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 AC092747.4-201ENST00000620519 1861 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 RN7SKP280-201ENST00000364196 304 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 YWHABP2-201ENST00000540201 713 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC131649.2-201ENST00000624925 4439 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 FAM32BP-201ENST00000344033 333 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 CYP2AC1P-201ENST00000407830 1173 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 IGKV1OR22-5-201ENST00000458718 354 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 HMGN2P25-201ENST00000486956 268 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 AC013356.1-201ENST00000489027 564 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 RPSAP51-201ENST00000497462 645 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 NIFKP7-201ENST00000503365 834 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 RNA5SP464-201ENST00000516251 108 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKDCP78527 OR4A17P-201ENST00000526032 904 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms