Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC3.86□□□□□ -1.79
NDUFA1O15239 DPPA3P2-202ENST00000557188 1219 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC3.86□□□□□ -1.79
NDUFA1O15239 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AL078601.3-201ENST00000573303 535 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 RN7SL290P-201ENST00000578661 300 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC3.86□□□□□ -1.79
NDUFA1O15239 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC3.86□□□□□ -1.79
NDUFA1O15239 COX6CP7-201ENST00000597056 208 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDUFA1O15239 AL356608.1-201ENST00000610034 820 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 AL135999.3-201ENST00000610501 812 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AL080312.2-201ENST00000613001 630 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 Six3os1_2.1-201ENST00000616963 217 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AL357140.4-201ENST00000636827 412 ntBASIC3.86□□□□□ -1.79
NDUFA1O15239 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC3.86□□□□□ -1.79
NDUFA1O15239 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NDUFA1O15239 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDUFA1O15239 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDUFA1O15239 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDUFA1O15239 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDUFA1O15239 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
NDUFA1O15239 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.86□□□□□ -1.79
NDUFA1O15239 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.86□□□□□ -1.79
NDUFA1O15239 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDUFA1O15239 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.85□□□□□ -1.79
NDUFA1O15239 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NDUFA1O15239 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NDUFA1O15239 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 TINAG-203ENST00000370869 782 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC016739.1-201ENST00000405359 345 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 MORN2-202ENST00000409077 465 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC117434.1-201ENST00000419971 836 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 LINC00328-2P-201ENST00000436585 219 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 RPL6P30-201ENST00000443382 862 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 BMS1P10-201ENST00000443754 1120 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 HMGB1P7-201ENST00000450921 612 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 CEACAMP11-201ENST00000455211 583 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 AC023424.1-201ENST00000496058 459 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 TMEM97P2-201ENST00000517841 403 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 FAU-203ENST00000525297 355 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AP003396.4-201ENST00000527574 265 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 AC079064.1-201ENST00000528365 362 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC036111.2-201ENST00000533247 901 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC006363.1-201ENST00000603806 463 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 LSM1P2-201ENST00000604911 322 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 AC139792.1-201ENST00000607051 647 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC3.85□□□□□ -1.79
NDUFA1O15239 SAMMSON-227ENST00000642114 1199 ntBASIC3.85□□□□□ -1.79
NDUFA1O15239 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC3.85□□□□□ -1.79
NDUFA1O15239 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.85□□□□□ -1.79
NDUFA1O15239 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.85□□□□□ -1.79
NDUFA1O15239 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.85□□□□□ -1.79
NDUFA1O15239 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDUFA1O15239 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms