Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.34□□□□□ -1.55
CHD8Q9HCK8 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.34□□□□□ -1.55
CHD8Q9HCK8 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CHD8Q9HCK8 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD8Q9HCK8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
CHD8Q9HCK8 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD8Q9HCK8 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD8Q9HCK8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CHD8Q9HCK8 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC132825.1-201ENST00000463573 2247 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC008957.3-201ENST00000624112 2242 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 SNORA71.3-201ENST00000362582 128 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 SNORA67-201ENST00000384423 137 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 CYP4F32P-201ENST00000426492 504 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 snoU13.20-201ENST00000459180 104 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC137695.1-201ENST00000604126 489 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 SNURFL-201ENST00000309296 343 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 RNU1-64P-201ENST00000365443 163 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC092824.1-201ENST00000483524 576 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AP002812.1-201ENST00000495378 474 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AF131215.7-201ENST00000602443 707 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC079414.3-201ENST00000612986 1090 ntBASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHD8Q9HCK8 AC009120.2-204ENST00000621548 2032 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 GPS2P1-201ENST00000411761 986 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RPL7P32-201ENST00000457119 744 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC087672.1-201ENST00000479876 766 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 MIR4270-201ENST00000581799 70 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC017100.2-201ENST00000584628 355 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AL953862.2-201ENST00000603089 820 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC145423.1-201ENST00000605712 336 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 MIR6075-201ENST00000620782 95 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 MIR6830-201ENST00000636015 70 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms