Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 AL139254.2-202ENST00000641937 1156 ntBASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 THAP12P7-201ENST00000520248 2290 ntBASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 AC138393.1-206ENST00000540997 1886 ntBASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LYSMD3Q7Z3D4 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AL590763.1-201ENST00000398297 1545 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 PSMC1P7-201ENST00000495689 1315 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AL008638.3-201ENST00000623027 5182 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 FRG1BP-201ENST00000278882 761 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 FRG1CP-201ENST00000358464 769 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 U3.1-201ENST00000362500 215 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RNA5SP27-201ENST00000363839 119 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RNA5SP79-201ENST00000365193 109 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RN7SKP1-201ENST00000365525 307 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AL512649.1-201ENST00000428997 581 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 FTH1P10-202ENST00000430907 550 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RPL35P8-201ENST00000433284 337 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 OR5M13P-201ENST00000433944 937 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 MTCYBP6-201ENST00000441810 138 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RPL7P31-201ENST00000450192 724 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 VDAC2P4-201ENST00000452925 711 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RFC5P1-201ENST00000454419 874 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RN7SL213P-201ENST00000463482 317 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC019235.1-201ENST00000503847 207 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SNORA31.13-201ENST00000516624 135 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AK6P1-201ENST00000540219 478 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC090515.3-201ENST00000560431 315 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC105275.2-201ENST00000567907 711 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AP000238.1-201ENST00000608759 426 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SAMMSON-227ENST00000642114 1199 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 AC068860.1-201ENST00000623701 3736 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 UGT2B24P-201ENST00000514441 1597 ntBASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.63□□□□□ -1.19
LYSMD3Q7Z3D4 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 MTCO1P23-201ENST00000415223 1526 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms