Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 MIR212-201ENST00000586026 110 ntBASIC5.4□□□□□ -1.54
C11orf88Q6PI97 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 AC011500.1-201ENST00000601963 469 ntBASIC5.4□□□□□ -1.54
C11orf88Q6PI97 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 AC005514.1-201ENST00000623521 208 ntBASIC5.4□□□□□ -1.54
C11orf88Q6PI97 SNORA16A-202ENST00000628458 135 ntBASIC5.4□□□□□ -1.54
C11orf88Q6PI97 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.4□□□□□ -1.54
C11orf88Q6PI97 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 NEK2P2-201ENST00000438441 1338 ntBASIC5.4□□□□□ -1.55
C11orf88Q6PI97 KYNUP3-201ENST00000574386 1341 ntBASIC5.4□□□□□ -1.55
C11orf88Q6PI97 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 AL603750.1-201ENST00000624216 1717 ntBASIC5.4□□□□□ -1.55
C11orf88Q6PI97 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
C11orf88Q6PI97 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 OR9K1P-202ENST00000641111 3217 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 SNORD1C-201ENST00000363315 78 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 RN7SKP187-201ENST00000365536 330 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL391422.1-201ENST00000402155 436 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 VIM2P-201ENST00000402383 1294 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL589655.1-201ENST00000405398 482 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 RPL26P37-201ENST00000411983 438 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL359885.1-201ENST00000415786 903 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 RPA2P2-201ENST00000419698 796 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC010086.1-201ENST00000437359 1052 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC114878.1-201ENST00000441166 358 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC245291.3-201ENST00000443400 292 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MTND3P4-201ENST00000453537 303 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 RN7SL70P-201ENST00000478322 302 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC090543.1-201ENST00000492168 485 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 RN7SL568P-201ENST00000493069 298 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 CDH12P2-201ENST00000504393 298 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC122718.2-201ENST00000505325 591 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC131392.1-201ENST00000506490 633 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC091849.1-201ENST00000509920 121 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 RNA5SP400-201ENST00000517155 111 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 HIGD1AP18-201ENST00000520730 278 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 SNRPCP6-201ENST00000528310 210 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC140063.1-201ENST00000541343 259 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MT1CP-201ENST00000567054 174 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MIR4271-201ENST00000582451 67 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 GLYATL1P2-202ENST00000588046 902 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AC024884.1-201ENST00000620583 399 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 CCNT2P1-201ENST00000423082 1315 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 BTBD10P1-201ENST00000549824 1352 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 TCP11X1-202ENST00000622971 1372 ntBASIC5.39□□□□□ -1.55
C11orf88Q6PI97 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C11orf88Q6PI97 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms