Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL357153.4-201ENST00000620487 1016 ntBASIC5.25□□□□□ -1.57
CLDN18P56856 AC022919.1-201ENST00000624979 626 ntBASIC5.25□□□□□ -1.57
CLDN18P56856 SNORA17.5-201ENST00000630429 132 ntBASIC5.25□□□□□ -1.57
CLDN18P56856 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN18P56856 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN18P56856 AC005225.5-201ENST00000623547 2225 ntBASIC5.25□□□□□ -1.57
CLDN18P56856 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN18P56856 PROS2P-201ENST00000474651 1951 ntBASIC5.25□□□□□ -1.57
CLDN18P56856 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN18P56856 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN18P56856 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CLDN18P56856 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN18P56856 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
CLDN18P56856 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 TMSB4XP4-201ENST00000323496 618 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN18P56856 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLDN18P56856 AL451046.1-201ENST00000406097 534 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN18P56856 AC093155.2-201ENST00000420734 937 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 AC127526.2-201ENST00000426436 775 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN18P56856 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 AL161636.2-201ENST00000445179 927 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.24□□□□□ -1.57
CLDN18P56856 HMGN1P36-201ENST00000446623 298 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN18P56856 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.24□□□□□ -1.57
CLDN18P56856 AC104109.1-201ENST00000498563 436 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 MIR2117-201ENST00000516780 80 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.24□□□□□ -1.57
CLDN18P56856 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN18P56856 AP001496.3-201ENST00000580230 913 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN18P56856 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
CLDN18P56856 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN18P56856 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 AC005725.1-201ENST00000577346 2607 ntBASIC5.24□□□□□ -1.57
CLDN18P56856 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLDN18P56856 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN18P56856 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN18P56856 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 RNU11-201ENST00000387069 134 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN18P56856 BX119321.1-201ENST00000428912 797 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN18P56856 SUMO2P3-201ENST00000438311 288 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 RN7SL273P-201ENST00000481561 299 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 CYCSP22-201ENST00000517555 339 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN18P56856 AP001804.1-201ENST00000526868 919 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 AC007346.2-201ENST00000564816 892 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AC012146.2-201ENST00000576545 416 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AL360012.1-201ENST00000602813 131 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN18P56856 AC126175.1-201ENST00000617041 758 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 RN7SL544P-201ENST00000617232 284 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 RN7SL763P-201ENST00000620922 284 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLDN18P56856 MIR193BHG-214ENST00000641765 509 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN18P56856 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN18P56856 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN18P56856 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN18P56856 LINC02019-201ENST00000608605 2060 ntBASIC5.23□□□□□ -1.57
CLDN18P56856 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 3317.5 ms