Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.85□□□□□ -1.15
VARSP26640 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 AL355802.3-201ENST00000607571 545 ntBASIC7.85□□□□□ -1.15
VARSP26640 AC012511.1-201ENST00000608140 449 ntBASIC7.85□□□□□ -1.15
VARSP26640 AC006238.1-201ENST00000609787 534 ntBASIC7.85□□□□□ -1.15
VARSP26640 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARSP26640 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARSP26640 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARSP26640 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.85□□□□□ -1.15
VARSP26640 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARSP26640 AC008555.1-201ENST00000561778 2757 ntBASIC7.85□□□□□ -1.15
VARSP26640 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.85□□□□□ -1.15
VARSP26640 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARSP26640 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.85□□□□□ -1.15
VARSP26640 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.85□□□□□ -1.15
VARSP26640 CCDC162P-202ENST00000368966 6751 ntBASIC7.85□□□□□ -1.15
VARSP26640 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
VARSP26640 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 DCAF13P3-201ENST00000561147 1334 ntBASIC7.84□□□□□ -1.15
VARSP26640 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 OR2M1P-201ENST00000318104 951 ntBASIC7.84□□□□□ -1.15
VARSP26640 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 Y_RNA.67-201ENST00000362870 100 ntBASIC7.84□□□□□ -1.15
VARSP26640 Y_RNA.72-201ENST00000362894 103 ntBASIC7.84□□□□□ -1.15
VARSP26640 SNORA51.2-201ENST00000364595 132 ntBASIC7.84□□□□□ -1.15
VARSP26640 MT-TR-201ENST00000387439 65 ntBASIC7.84□□□□□ -1.15
VARSP26640 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
VARSP26640 ATP5HP3-201ENST00000396994 486 ntBASIC7.84□□□□□ -1.15
VARSP26640 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 AL356432.1-201ENST00000405809 419 ntBASIC7.84□□□□□ -1.15
VARSP26640 Y_RNA.598-201ENST00000410480 95 ntBASIC7.84□□□□□ -1.15
VARSP26640 RN7SKP39-201ENST00000410773 322 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC109780.2-201ENST00000413467 845 ntBASIC7.84□□□□□ -1.15
VARSP26640 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 RPS27AP14-201ENST00000422868 454 ntBASIC7.84□□□□□ -1.15
VARSP26640 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 OR52B5P-201ENST00000435337 951 ntBASIC7.84□□□□□ -1.15
VARSP26640 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 AC097527.1-201ENST00000437031 530 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 OR3B1P-201ENST00000437536 893 ntBASIC7.84□□□□□ -1.15
VARSP26640 SDCBPP1-201ENST00000440192 890 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 AL157827.1-201ENST00000447622 132 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC021660.1-201ENST00000465006 554 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC087312.1-201ENST00000471411 480 ntBASIC7.84□□□□□ -1.15
VARSP26640 RPL39P36-201ENST00000490784 156 ntBASIC7.84□□□□□ -1.15
VARSP26640 DYNLL1P6-201ENST00000503440 264 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 HMGB1P29-201ENST00000505659 499 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.84□□□□□ -1.15
VARSP26640 AF131216.2-201ENST00000512316 564 ntBASIC7.84□□□□□ -1.15
VARSP26640 snoU109.5-201ENST00000516231 132 ntBASIC7.84□□□□□ -1.15
VARSP26640 SCARNA20.3-201ENST00000516913 131 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 AC087276.1-201ENST00000529659 480 ntBASIC7.84□□□□□ -1.15
VARSP26640 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 AC020661.2-201ENST00000560114 134 ntBASIC7.84□□□□□ -1.15
VARSP26640 RBM22P12-201ENST00000567098 1255 ntBASIC7.84□□□□□ -1.15
VARSP26640 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.84□□□□□ -1.15
VARSP26640 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 MARK3P1-201ENST00000604796 643 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC011815.3-201ENST00000624194 473 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC114546.4-201ENST00000624413 369 ntBASIC7.84□□□□□ -1.15
VARSP26640 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms