Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 MIR378H-201ENST00000579966 83 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL031429.2-201ENST00000602605 649 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL356752.1-201ENST00000615844 593 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 AL157762.1-201ENST00000619612 415 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 AC073488.3-201ENST00000631611 778 ntBASIC5.59□□□□□ -1.51
SNX3O60493 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
SNX3O60493 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
SNX3O60493 OR11H2-202ENST00000641517 1085 ntBASIC5.59□□□□□ -1.51
SNX3O60493 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 AC009220.2-201ENST00000489759 1751 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL034549.2-201ENST00000618285 3373 ntBASIC5.59□□□□□ -1.51
SNX3O60493 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SNX3O60493 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SNX3O60493 GNL2P1-201ENST00000451274 2190 ntBASIC5.59□□□□□ -1.52
SNX3O60493 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.59□□□□□ -1.52
SNX3O60493 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
SNX3O60493 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SNX3O60493 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SNX3O60493 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SNX3O60493 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNX3O60493 AL132875.1-201ENST00000403623 949 ntBASIC5.58□□□□□ -1.52
SNX3O60493 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX3O60493 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX3O60493 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.58□□□□□ -1.52
SNX3O60493 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 AL590004.3-202ENST00000445883 451 ntBASIC5.58□□□□□ -1.52
SNX3O60493 FTLP8-201ENST00000446770 267 ntBASIC5.58□□□□□ -1.52
SNX3O60493 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX3O60493 RBMY2EP-202ENST00000456360 940 ntBASIC5.58□□□□□ -1.52
SNX3O60493 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX3O60493 AC023245.1-201ENST00000468501 517 ntBASIC5.58□□□□□ -1.52
SNX3O60493 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 AGGF1P3-201ENST00000493675 1213 ntBASIC5.58□□□□□ -1.52
SNX3O60493 MYL12BP2-201ENST00000503948 512 ntBASIC5.58□□□□□ -1.52
SNX3O60493 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX3O60493 MINOS1P4-201ENST00000515470 318 ntBASIC5.58□□□□□ -1.52
SNX3O60493 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX3O60493 RNU6-513P-201ENST00000516104 104 ntBASIC5.58□□□□□ -1.52
SNX3O60493 FTH1P11-201ENST00000517577 551 ntBASIC5.58□□□□□ -1.52
SNX3O60493 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
SNX3O60493 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX3O60493 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 SMIM12P1-201ENST00000603004 274 ntBASIC5.58□□□□□ -1.52
SNX3O60493 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 MIR6849-201ENST00000618543 69 ntBASIC5.58□□□□□ -1.52
SNX3O60493 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 AC025574.1-201ENST00000554784 1653 ntBASIC5.58□□□□□ -1.52
SNX3O60493 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX3O60493 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX3O60493 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
SNX3O60493 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNX3O60493 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SNX3O60493 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX3O60493 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
SNX3O60493 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX3O60493 Y_RNA.62-201ENST00000362840 99 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC007618.1-201ENST00000366455 732 ntBASIC5.57□□□□□ -1.52
SNX3O60493 RNA5SP155-201ENST00000411154 129 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC019205.1-201ENST00000421830 730 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms