Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ARF4P1-201ENST00000605447 541 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC099778.2-201ENST00000610904 211 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 MIR6753-201ENST00000617169 164 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 RPL36AP21-202ENST00000639134 430 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 C14orf159-229ENST00000523816 2764 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 KCTD20-204ENST00000449081 4094 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 ADHFE1-204ENST00000415254 1956 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CAMKK1-203ENST00000381769 3508 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 GFI1B-201ENST00000339463 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 NIPAL1-201ENST00000295461 5300 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 ACSL6-204ENST00000379244 2658 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TCHP-201ENST00000312777 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TNFSF14-201ENST00000245912 4336 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TTC12-219ENST00000529221 2315 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 SKP2-202ENST00000274255 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ANKRD13C-201ENST00000262346 3327 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RBM23-202ENST00000346528 2361 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 R3HDM2-205ENST00000403821 3347 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC135048.4-201ENST00000624286 3641 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ATG16L1-203ENST00000392017 3405 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC093390.1-201ENST00000426976 3403 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 BTNL2-203ENST00000454136 1460 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 SLC22A8-203ENST00000430500 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC097468.1-201ENST00000441450 1992 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 WHRN-204ENST00000374059 3278 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 PMEL-206ENST00000548747 2757 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 Y_RNA.111-201ENST00000363248 100 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 Y_RNA.341-201ENST00000365341 102 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MOG-222ENST00000396701 910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MAP3K7CL-204ENST00000399925 692 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 FTH1P19-201ENST00000402402 528 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RNU6-855P-201ENST00000410395 104 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AL627313.1-201ENST00000428860 238 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AL109810.1-201ENST00000435008 495 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL483P-201ENST00000478417 285 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL76P-201ENST00000482435 289 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC008040.4-201ENST00000494834 768 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC110753.1-201ENST00000505711 1022 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TUBB8P3-201ENST00000510182 803 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 HSD3BP4-201ENST00000511509 1120 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC034206.1-202ENST00000514446 634 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms