Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 CAST-244ENST00000515663 1473 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 OR3A3-201ENST00000291231 966 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 RNA5SP250-201ENST00000362534 119 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 RNA5SP74-201ENST00000363538 109 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 RNU6-505P-201ENST00000384427 107 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 MIR568-201ENST00000385036 95 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 MIR1305-201ENST00000408300 86 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 MIR1269A-201ENST00000408636 105 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 RNU2-8P-201ENST00000410727 190 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 RNU6-1148P-201ENST00000410992 104 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 LYPLA1P1-201ENST00000434514 622 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 BSNDP4-201ENST00000436076 388 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 UBE2V1P5-201ENST00000440070 405 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 HIGD1AP16-201ENST00000450986 258 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC097493.1-201ENST00000463958 372 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 RPL12P8-201ENST00000482081 580 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 SNORD60.2-201ENST00000516883 86 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 SNORA48.10-201ENST00000516965 160 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC027309.2-201ENST00000520566 192 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 IGHVII-30-1-201ENST00000522218 301 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AP003181.2-201ENST00000528941 181 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 POLR2KP1-201ENST00000553226 168 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 MPPE1P1-201ENST00000557286 1076 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC079075.1-201ENST00000559543 878 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 BCRP9-201ENST00000605312 388 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 RNU6-87P-201ENST00000607561 108 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC009053.4-201ENST00000614366 108 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC011592.1-201ENST00000624647 3634 ntBASIC7.64□□□□□ -1.19
USB1Q9BQ65 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 MTCO1P12-201ENST00000414273 1543 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 OR9K1P-201ENST00000326513 941 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 RNU6-769P-201ENST00000384407 104 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 RNU6-456P-201ENST00000384493 107 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms