Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 AL590065.1-201ENST00000603371 4774 ntBASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 HSPA8P11-201ENST00000508840 1898 ntBASIC7.75□□□□□ -1.17
FOXR1Q6PIV2 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RNU4-73P-201ENST00000363164 141 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RNA5SP378-201ENST00000363646 120 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 SNORA30B-201ENST00000365319 129 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 Y_RNA.453-201ENST00000384223 109 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RNVU1-15-201ENST00000384476 165 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 NHP2P2-201ENST00000396362 460 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 OLA1P1-201ENST00000396387 1189 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC011753.4-201ENST00000417974 311 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL139421.1-201ENST00000423010 169 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 OR5P4P-201ENST00000424698 917 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RPL21P43-201ENST00000425440 472 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL606490.7-201ENST00000433136 191 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC092427.1-201ENST00000439177 601 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL353803.3-201ENST00000444641 335 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 CEACAMP5-201ENST00000448037 961 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 OR6K1P-201ENST00000456766 971 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC147055.4-201ENST00000504399 745 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC073648.3-201ENST00000504939 925 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC097173.1-201ENST00000505862 819 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 EIF3KP1-201ENST00000513279 656 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 OR5AZ1P-201ENST00000527448 943 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 MIR4637-201ENST00000582405 84 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC020765.1-201ENST00000604296 328 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL022154.1-201ENST00000604698 785 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL513218.1-201ENST00000606527 391 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 MIR7162-201ENST00000611134 69 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC002553.4-201ENST00000616896 331 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RPL36AP21-202ENST00000639134 430 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AL596275.2-208ENST00000641192 594 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 AC125238.2-201ENST00000430003 1440 ntBASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.74□□□□□ -1.17
FOXR1Q6PIV2 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC007993.1-201ENST00000621298 2430 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AC130464.1-201ENST00000416201 1500 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 MTND4P27-201ENST00000450813 1354 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 Y_RNA.263-201ENST00000364659 114 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 Y_RNA.295-201ENST00000364918 102 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 RNA5SP18-201ENST00000390935 121 ntBASIC7.73□□□□□ -1.17
FOXR1Q6PIV2 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms