Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC074255.1-201ENST00000511259 501 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 GAPDHP71-201ENST00000511530 1003 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RN7SKP35-201ENST00000517210 151 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 SEPT10P1-201ENST00000517342 1162 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 AC018809.2-201ENST00000602436 3823 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 AC010632.3-201ENST00000611377 369 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 uc_338.31-201ENST00000615595 186 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RPS2P45-201ENST00000469997 2057 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC092681.1-201ENST00000297369 291 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 GCNT1P4-201ENST00000404096 329 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 RNF10P1-201ENST00000418589 369 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 TUBB4BP6-201ENST00000437576 479 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC097463.1-201ENST00000447288 481 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 OR52I1-201ENST00000450052 1050 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC098847.1-201ENST00000473094 348 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ATP5LP5-201ENST00000483050 299 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 RN7SL57P-201ENST00000493687 290 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC112484.3-201ENST00000505910 329 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 PRMT5P1-201ENST00000514351 598 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 RN7SKP253-201ENST00000516424 309 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 RN7SKP238-201ENST00000516483 249 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC116917.1-201ENST00000520558 305 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC006530.1-201ENST00000555980 571 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 uc_338.29-201ENST00000615099 168 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 AC079097.1-201ENST00000512187 1399 ntBASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM49D1C9J1S8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC083899.1-201ENST00000454465 3819 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AL360270.2-201ENST00000562952 5985 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 RNFT1P3-201ENST00000340898 1052 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 MIR191-201ENST00000384873 92 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 NANOGP9-201ENST00000439890 892 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 RPL5P25-201ENST00000441148 775 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 RPL5P7-201ENST00000444235 813 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AC007383.1-201ENST00000445875 636 ntBASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM49D1C9J1S8 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms