Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HPS1Q92902 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC7.55□□□□□ -1.2
HPS1Q92902 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HPS1Q92902 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
HPS1Q92902 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.55□□□□□ -1.2
HPS1Q92902 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.55□□□□□ -1.2
HPS1Q92902 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HPS1Q92902 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HPS1Q92902 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 UGT2B24P-201ENST00000514441 1597 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS1Q92902 AC009237.3-203ENST00000442128 3551 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 AL034417.4-202ENST00000642135 2236 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 CENPW-202ENST00000368326 443 ntTSL 2 BASIC7.54□□□□□ -1.2
HPS1Q92902 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 Y_RNA.395-201ENST00000383945 109 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RNU6-1106P-201ENST00000390845 107 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC087752.1-201ENST00000391360 558 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 PRELID1P2-201ENST00000407805 396 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 MIR1284-201ENST00000408337 120 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RN7SKP85-201ENST00000411349 318 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 YWHAEP5-201ENST00000431545 765 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 RPL35P8-201ENST00000433284 337 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 SEPT7P5-201ENST00000434048 306 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 CYCSP11-201ENST00000436426 315 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 SNX18P2-201ENST00000438540 808 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 AC104843.1-201ENST00000451203 319 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 C1DP4-201ENST00000455429 424 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS1Q92902 RN7SL370P-201ENST00000470869 295 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RPL7P39-201ENST00000481157 744 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AF305872.1-201ENST00000485217 471 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 SETP14-201ENST00000497538 873 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 AC108064.1-201ENST00000513791 460 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 OR10J2P-201ENST00000514684 961 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RN7SKP31-201ENST00000516354 278 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RNA5SP101-201ENST00000517036 108 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.54□□□□□ -1.2
HPS1Q92902 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.54□□□□□ -1.2
HPS1Q92902 VDAC2P2-201ENST00000544463 901 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AL352979.1-201ENST00000554238 297 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.54□□□□□ -1.2
HPS1Q92902 AC055876.1-202ENST00000567053 138 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 RN7SL474P-201ENST00000583485 301 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS1Q92902 DYNLL1P1-201ENST00000595442 269 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 HMGN2P46-208ENST00000598619 490 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AL133351.4-201ENST00000604204 631 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 FAM238B-204ENST00000612040 423 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC245505.3-201ENST00000616788 358 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.54□□□□□ -1.2
HPS1Q92902 AC022106.2-201ENST00000620114 757 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 MIR8089-201ENST00000620165 82 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC027176.3-201ENST00000624460 586 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 AC138649.5-201ENST00000637456 137 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HPS1Q92902 SOCS5P2-201ENST00000449637 1359 ntBASIC7.54□□□□□ -1.2
HPS1Q92902 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS1Q92902 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS1Q92902 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.54□□□□□ -1.2
HPS1Q92902 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.54□□□□□ -1.2
HPS1Q92902 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS1Q92902 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
HPS1Q92902 AC123769.2-201ENST00000624332 5984 ntBASIC7.53□□□□□ -1.2
HPS1Q92902 AL031985.3-201ENST00000565390 2449 ntBASIC7.53□□□□□ -1.2
HPS1Q92902 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.53□□□□□ -1.2
HPS1Q92902 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.53□□□□□ -1.2
HPS1Q92902 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS1Q92902 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
HPS1Q92902 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS1Q92902 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
HPS1Q92902 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
HPS1Q92902 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC7.53□□□□□ -1.2
HPS1Q92902 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS1Q92902 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.53□□□□□ -1.2
HPS1Q92902 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
HPS1Q92902 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC7.53□□□□□ -1.2
HPS1Q92902 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.53□□□□□ -1.2
HPS1Q92902 RNU6-510P-201ENST00000391239 108 ntBASIC7.53□□□□□ -1.2
HPS1Q92902 CISD1P1-201ENST00000393907 327 ntBASIC7.53□□□□□ -1.2
HPS1Q92902 MIR548F4-201ENST00000408515 105 ntBASIC7.53□□□□□ -1.2
HPS1Q92902 RPL26P37-201ENST00000411983 438 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms