Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ARHGAP42P2-201ENST00000416089 2140 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 NCLP2-201ENST00000416078 1462 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AL390237.1-201ENST00000404226 1415 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 RNU6-666P-201ENST00000363499 107 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 RNU6-1017P-201ENST00000363613 106 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC017078.1-201ENST00000416146 368 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MTCO1P3-201ENST00000429327 192 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 OR51P1P-201ENST00000447547 942 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MTND2P19-201ENST00000449129 1012 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 OR7E157P-201ENST00000494376 911 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 PRELID3BP7-201ENST00000503606 469 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC006530.1-201ENST00000555980 571 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 SYPL1P2-201ENST00000582878 727 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 NPIPB1P-202ENST00000588786 828 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC104184.1-201ENST00000607513 721 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MIR4278-201ENST00000636094 69 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 NSRP1P1-201ENST00000444067 1693 ntBASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.05□□□□□ -1.12
TMEM88BA6NKF7 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 CASC19-206ENST00000641028 1430 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 KARSP3-201ENST00000571212 1504 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 RNA5SP474-201ENST00000391234 90 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 RNA5SP178-201ENST00000410380 128 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 RANP6-201ENST00000413691 644 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 MTCO3P41-201ENST00000414801 328 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 AC027644.1-201ENST00000419595 298 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 USP9YP31-201ENST00000431405 881 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 AC245047.1-201ENST00000433276 873 ntBASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.04□□□□□ -1.12
TMEM88BA6NKF7 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms