Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC010740.1-201ENST00000417035 684 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 GAPDHP14-201ENST00000450472 937 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC104164.1-201ENST00000460282 590 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC068228.1-201ENST00000461723 211 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 RPSAP51-201ENST00000497462 645 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 LDHBP3-201ENST00000514909 822 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 Vault.2-201ENST00000516519 98 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC011853.1-201ENST00000518911 454 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AL359219.2-201ENST00000555184 348 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC007956.1-201ENST00000555623 542 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC007786.3-201ENST00000615154 596 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AL355974.3-201ENST00000617383 467 ntBASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRAPPC4Q9Y296 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 RN7SKP145-201ENST00000363291 303 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 RNA5SP211-201ENST00000365516 117 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 MIR130B-202ENST00000385018 82 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AC099677.3-201ENST00000427081 395 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 ATP5LP2-201ENST00000440646 311 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AL158068.1-201ENST00000506116 616 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AC126615.2-201ENST00000553003 515 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AL049840.6-201ENST00000604583 345 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 OR51C1P-201ENST00000608504 942 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 AP000550.3-201ENST00000637734 379 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAPPC4Q9Y296 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms