Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.99□□□□□ -1.29
NUP98P52948 AL121594.2-201ENST00000541658 472 ntBASIC6.99□□□□□ -1.29
NUP98P52948 RN7SL708P-201ENST00000580952 299 ntBASIC6.99□□□□□ -1.29
NUP98P52948 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.99□□□□□ -1.29
NUP98P52948 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 LINC01739-205ENST00000641890 573 ntBASIC6.99□□□□□ -1.29
NUP98P52948 SAMMSON-227ENST00000642114 1199 ntBASIC6.99□□□□□ -1.29
NUP98P52948 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.99□□□□□ -1.29
NUP98P52948 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 ZNF101P1-201ENST00000435701 1720 ntBASIC6.99□□□□□ -1.29
NUP98P52948 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.99□□□□□ -1.29
NUP98P52948 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.99□□□□□ -1.29
NUP98P52948 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 ABCA11P-202ENST00000504019 2110 ntBASIC6.99□□□□□ -1.29
NUP98P52948 AP004607.3-201ENST00000530354 3915 ntBASIC6.99□□□□□ -1.29
NUP98P52948 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 AC007938.2-201ENST00000604666 2634 ntBASIC6.99□□□□□ -1.29
NUP98P52948 RPL23P2-201ENST00000320371 421 ntBASIC6.99□□□□□ -1.29
NUP98P52948 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 MIR551A-201ENST00000385042 96 ntBASIC6.99□□□□□ -1.29
NUP98P52948 DUTP5-201ENST00000406790 469 ntBASIC6.99□□□□□ -1.29
NUP98P52948 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NUP98P52948 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.99□□□□□ -1.29
NUP98P52948 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.99□□□□□ -1.29
NUP98P52948 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.99□□□□□ -1.29
NUP98P52948 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 AC009948.3-201ENST00000603415 1798 ntBASIC6.99□□□□□ -1.29
NUP98P52948 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.98□□□□□ -1.29
NUP98P52948 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NUP98P52948 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 AL162456.1-201ENST00000634535 2006 ntBASIC6.98□□□□□ -1.29
NUP98P52948 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 AC022164.1-201ENST00000568767 2673 ntBASIC6.98□□□□□ -1.29
NUP98P52948 AL109941.1-201ENST00000401925 229 ntBASIC6.98□□□□□ -1.29
NUP98P52948 RN7SKP125-201ENST00000410481 302 ntBASIC6.98□□□□□ -1.29
NUP98P52948 SLC35E1P1-201ENST00000419313 864 ntBASIC6.98□□□□□ -1.29
NUP98P52948 AC073850.1-201ENST00000449243 255 ntBASIC6.98□□□□□ -1.29
NUP98P52948 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.98□□□□□ -1.29
NUP98P52948 RPL7AP6-201ENST00000477943 801 ntBASIC6.98□□□□□ -1.29
NUP98P52948 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.98□□□□□ -1.29
NUP98P52948 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.98□□□□□ -1.29
NUP98P52948 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.98□□□□□ -1.29
NUP98P52948 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NUP98P52948 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.98□□□□□ -1.29
NUP98P52948 AP005403.1-201ENST00000579720 229 ntBASIC6.98□□□□□ -1.29
NUP98P52948 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 BRD7P6-201ENST00000431406 1860 ntBASIC6.98□□□□□ -1.29
NUP98P52948 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
NUP98P52948 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.98□□□□□ -1.29
NUP98P52948 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NUP98P52948 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
NUP98P52948 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NUP98P52948 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 AC009804.1-201ENST00000400949 179 ntBASIC6.97□□□□□ -1.29
NUP98P52948 NANOGP9-201ENST00000439890 892 ntBASIC6.97□□□□□ -1.29
NUP98P52948 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.97□□□□□ -1.29
NUP98P52948 AL389915.2-201ENST00000454576 441 ntBASIC6.97□□□□□ -1.29
NUP98P52948 RN7SKP253-201ENST00000516424 309 ntBASIC6.97□□□□□ -1.29
NUP98P52948 RN7SKP99-201ENST00000517028 307 ntBASIC6.97□□□□□ -1.29
NUP98P52948 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.97□□□□□ -1.29
NUP98P52948 AC137627.1-201ENST00000545761 289 ntBASIC6.97□□□□□ -1.29
NUP98P52948 AL049779.2-201ENST00000553847 315 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms