Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GNL2P1-201ENST00000451274 2190 ntBASIC5.47□□□□□ -1.53
RFC3P40938 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 AC012254.3-201ENST00000591183 2117 ntBASIC5.47□□□□□ -1.53
RFC3P40938 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC3P40938 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 AC090220.1-201ENST00000593078 1699 ntBASIC5.47□□□□□ -1.53
RFC3P40938 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
RFC3P40938 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.46□□□□□ -1.53
RFC3P40938 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RFC3P40938 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RFC3P40938 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.46□□□□□ -1.53
RFC3P40938 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFC3P40938 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFC3P40938 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RFC3P40938 AC087752.1-201ENST00000391360 558 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.46□□□□□ -1.54
RFC3P40938 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 AL354868.1-201ENST00000417077 482 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 NMD3P2-201ENST00000421815 761 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 VN1R110P-201ENST00000438988 971 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AL161636.2-201ENST00000445179 927 ntBASIC5.46□□□□□ -1.54
RFC3P40938 UBE2V2P4-201ENST00000447495 259 ntBASIC5.46□□□□□ -1.54
RFC3P40938 RN7SL101P-201ENST00000496350 279 ntBASIC5.46□□□□□ -1.54
RFC3P40938 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFC3P40938 AC008629.2-201ENST00000503783 483 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AC011411.1-201ENST00000509592 876 ntBASIC5.46□□□□□ -1.54
RFC3P40938 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 RNU6-964P-201ENST00000516524 69 ntBASIC5.46□□□□□ -1.54
RFC3P40938 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 OR4H6P-201ENST00000563771 921 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 ZNF322P1-201ENST00000568013 1209 ntBASIC5.46□□□□□ -1.54
RFC3P40938 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 FAM27E4-201ENST00000605259 342 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC3P40938 AC127024.6-201ENST00000621598 424 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC3P40938 AC116667.2-201ENST00000641075 823 ntBASIC5.46□□□□□ -1.54
RFC3P40938 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RFC3P40938 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RFC3P40938 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFC3P40938 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
RFC3P40938 AC027088.4-201ENST00000611559 1947 ntBASIC5.46□□□□□ -1.54
RFC3P40938 AL442128.2-201ENST00000620246 1824 ntBASIC5.46□□□□□ -1.54
RFC3P40938 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.45□□□□□ -1.54
RFC3P40938 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.45□□□□□ -1.54
RFC3P40938 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RFC3P40938 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RFC3P40938 AC005522.1-201ENST00000395416 346 ntBASIC5.45□□□□□ -1.54
RFC3P40938 AL512422.1-201ENST00000407033 553 ntBASIC5.45□□□□□ -1.54
RFC3P40938 TMA16P2-201ENST00000413187 601 ntBASIC5.45□□□□□ -1.54
RFC3P40938 AL035660.1-201ENST00000422041 222 ntBASIC5.45□□□□□ -1.54
RFC3P40938 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RFC3P40938 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 AC126120.1-201ENST00000431082 470 ntBASIC5.45□□□□□ -1.54
RFC3P40938 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 BMS1P10-201ENST00000443754 1120 ntBASIC5.45□□□□□ -1.54
RFC3P40938 OR13K1P-201ENST00000444577 975 ntBASIC5.45□□□□□ -1.54
RFC3P40938 AL022237.1-201ENST00000446663 358 ntBASIC5.45□□□□□ -1.54
RFC3P40938 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.45□□□□□ -1.54
RFC3P40938 NPM1P28-201ENST00000492269 840 ntBASIC5.45□□□□□ -1.54
RFC3P40938 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms