Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SCOCP1-201ENST00000554676 349 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC090950.1-201ENST00000604625 830 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC009597.2-201ENST00000604659 592 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC103710.3-201ENST00000608157 948 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC004908.2-201ENST00000609090 574 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL844908.1-201ENST00000609953 652 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC013553.3-201ENST00000612943 615 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 KANSL2-201ENST00000420613 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ABCA17P-204ENST00000494925 3478 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AP001350.1-201ENST00000601906 1524 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 SPATA31E3P-201ENST00000613133 4214 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 RNU6-223P-201ENST00000362830 107 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 Y_RNA.452-201ENST00000384202 108 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 LDHAP4-201ENST00000397561 998 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AL358781.2-201ENST00000415423 473 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 HCG21-204ENST00000419481 605 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 RPE-207ENST00000435437 858 ntTSL 2 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AL356498.1-201ENST00000443334 334 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC090954.1-201ENST00000445502 361 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 RN7SL239P-201ENST00000490061 300 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 RN7SL472P-201ENST00000492799 293 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC017037.2-201ENST00000513850 890 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 TPM3P3-201ENST00000521343 354 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 OR5BN1P-201ENST00000532955 829 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC009117.1-201ENST00000563948 554 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 ARGFXP2-201ENST00000579304 949 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 RN7SL203P-201ENST00000579600 296 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 MIR4742-201ENST00000581069 85 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms