Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 OR4G11P-202ENST00000642116 1414 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 CDR1-202ENST00000625883 1485 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 IPO7P2-201ENST00000451446 1750 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HLA-CQ95604 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 TMSB4XP2-201ENST00000335179 210 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HLA-CQ95604 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 RPL21P107-201ENST00000411449 460 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-CQ95604 GAPDHP49-201ENST00000421421 961 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 HSPE1P16-201ENST00000426640 348 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 ZNF887P-201ENST00000431363 1407 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 DNAJB5P1-201ENST00000454004 806 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 GUCY2GP-201ENST00000479705 3222 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-CQ95604 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 OR7E87P-201ENST00000532397 929 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-CQ95604 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.16□□□□□ -1.1
HLA-CQ95604 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-CQ95604 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 ASNSP6-201ENST00000592770 1618 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 AP001429.1-201ENST00000602568 530 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 AC010332.1-201ENST00000620439 97 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AL158801.5-201ENST00000623123 465 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AL359922.3-201ENST00000624779 1670 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.16□□□□□ -1.1
HLA-CQ95604 OR2A3P-202ENST00000641249 1776 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-CQ95604 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-CQ95604 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.16□□□□□ -1.1
HLA-CQ95604 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-CQ95604 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HLA-CQ95604 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 HSPD1P1-201ENST00000503199 1726 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.15□□□□□ -1.1
HLA-CQ95604 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HLA-CQ95604 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
HLA-CQ95604 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC8.15□□□□□ -1.1
HLA-CQ95604 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 RNU6-839P-201ENST00000363347 108 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RNA5SP260-201ENST00000363849 111 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RN7SKP118-201ENST00000364331 330 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RNA5SP185-201ENST00000390963 114 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AL603766.1-201ENST00000407763 664 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RNA5SP177-201ENST00000410122 107 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RPLP1P10-201ENST00000413972 339 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms