Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
RAE1P78406 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 CCAT2-201ENST00000630920 1752 ntBASIC5.83□□□□□ -1.48
RAE1P78406 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.83□□□□□ -1.48
RAE1P78406 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RAE1P78406 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 RNA5SP375-201ENST00000362975 119 ntBASIC5.83□□□□□ -1.48
RAE1P78406 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.83□□□□□ -1.48
RAE1P78406 MIR551B-201ENST00000384984 96 ntBASIC5.83□□□□□ -1.48
RAE1P78406 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 SNORA77.2-201ENST00000408571 112 ntBASIC5.83□□□□□ -1.48
RAE1P78406 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 RNU6-584P-201ENST00000410350 95 ntBASIC5.83□□□□□ -1.48
RAE1P78406 RN7SKP108-201ENST00000411367 328 ntBASIC5.83□□□□□ -1.48
RAE1P78406 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.83□□□□□ -1.48
RAE1P78406 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.83□□□□□ -1.48
RAE1P78406 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 VN1R20P-201ENST00000425215 966 ntBASIC5.83□□□□□ -1.48
RAE1P78406 AC007563.3-201ENST00000433233 371 ntBASIC5.83□□□□□ -1.48
RAE1P78406 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.83□□□□□ -1.48
RAE1P78406 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.83□□□□□ -1.48
RAE1P78406 AC245517.2-201ENST00000442890 346 ntBASIC5.83□□□□□ -1.48
RAE1P78406 AL590004.3-202ENST00000445883 451 ntBASIC5.83□□□□□ -1.48
RAE1P78406 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.83□□□□□ -1.48
RAE1P78406 RPL23AP60-201ENST00000450011 454 ntBASIC5.83□□□□□ -1.48
RAE1P78406 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.83□□□□□ -1.48
RAE1P78406 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 AC004890.1-201ENST00000461005 181 ntBASIC5.83□□□□□ -1.48
RAE1P78406 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 H3F3AP5-201ENST00000475267 429 ntBASIC5.83□□□□□ -1.48
RAE1P78406 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.83□□□□□ -1.48
RAE1P78406 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 ZNF519P4-201ENST00000514008 125 ntBASIC5.83□□□□□ -1.48
RAE1P78406 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.83□□□□□ -1.48
RAE1P78406 TPM3P3-201ENST00000521343 354 ntBASIC5.83□□□□□ -1.48
RAE1P78406 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.83□□□□□ -1.48
RAE1P78406 OR4A6P-201ENST00000534364 970 ntBASIC5.83□□□□□ -1.48
RAE1P78406 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.83□□□□□ -1.48
RAE1P78406 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 DPPA3P2-202ENST00000557188 1219 ntBASIC5.83□□□□□ -1.48
RAE1P78406 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.83□□□□□ -1.48
RAE1P78406 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.83□□□□□ -1.48
RAE1P78406 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.83□□□□□ -1.48
RAE1P78406 NDUFB9P1-201ENST00000604683 510 ntBASIC5.83□□□□□ -1.48
RAE1P78406 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 AC018690.1-201ENST00000608144 626 ntBASIC5.83□□□□□ -1.48
RAE1P78406 AC099654.8-201ENST00000637757 681 ntBASIC5.83□□□□□ -1.48
RAE1P78406 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.83□□□□□ -1.48
RAE1P78406 AC022164.1-201ENST00000568767 2673 ntBASIC5.83□□□□□ -1.48
RAE1P78406 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.83□□□□□ -1.48
RAE1P78406 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.83□□□□□ -1.48
RAE1P78406 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.83□□□□□ -1.48
RAE1P78406 AC079753.1-201ENST00000623243 3868 ntBASIC5.82□□□□□ -1.48
RAE1P78406 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AL645568.2-201ENST00000432815 1337 ntBASIC5.82□□□□□ -1.48
RAE1P78406 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AC016583.1-201ENST00000624221 2431 ntBASIC5.82□□□□□ -1.48
RAE1P78406 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAE1P78406 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RAE1P78406 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AL139805.1-201ENST00000407837 289 ntBASIC5.82□□□□□ -1.48
RAE1P78406 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.82□□□□□ -1.48
RAE1P78406 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 AC114973.1-201ENST00000429057 632 ntBASIC5.82□□□□□ -1.48
RAE1P78406 MTATP6P17-201ENST00000431030 672 ntBASIC5.82□□□□□ -1.48
RAE1P78406 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 BX679664.2-201ENST00000439282 283 ntBASIC5.82□□□□□ -1.48
RAE1P78406 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 RAB28P2-201ENST00000454299 641 ntBASIC5.82□□□□□ -1.48
RAE1P78406 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 GUSBP9-201ENST00000510138 584 ntBASIC5.82□□□□□ -1.48
RAE1P78406 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 AP003355.1-201ENST00000518956 587 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 569.3 ms