Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.85□□□□□ -1.63
PAX9P55771 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PAX9P55771 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.85□□□□□ -1.63
PAX9P55771 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.85□□□□□ -1.63
PAX9P55771 AL158152.1-201ENST00000602652 1435 ntBASIC4.85□□□□□ -1.63
PAX9P55771 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PAX9P55771 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PAX9P55771 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PAX9P55771 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PAX9P55771 AC022325.1-201ENST00000502748 2199 ntBASIC4.85□□□□□ -1.63
PAX9P55771 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PAX9P55771 THAP12P9-201ENST00000503971 2360 ntBASIC4.85□□□□□ -1.63
PAX9P55771 AC093671.1-201ENST00000624981 2929 ntBASIC4.85□□□□□ -1.63
PAX9P55771 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.85□□□□□ -1.63
PAX9P55771 AC010266.2-201ENST00000564741 3255 ntBASIC4.85□□□□□ -1.63
PAX9P55771 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.85□□□□□ -1.63
PAX9P55771 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PAX9P55771 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PAX9P55771 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PAX9P55771 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PAX9P55771 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PAX9P55771 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 RNA5SP308-201ENST00000362532 115 ntBASIC4.84□□□□□ -1.63
PAX9P55771 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 RAB5CP1-201ENST00000395972 580 ntBASIC4.84□□□□□ -1.63
PAX9P55771 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.84□□□□□ -1.63
PAX9P55771 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 SDC4P-201ENST00000453285 601 ntBASIC4.84□□□□□ -1.63
PAX9P55771 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 MTND3P3-201ENST00000505004 126 ntBASIC4.84□□□□□ -1.63
PAX9P55771 SEC11B-201ENST00000518383 499 ntBASIC4.84□□□□□ -1.63
PAX9P55771 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.84□□□□□ -1.63
PAX9P55771 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 AC006518.1-201ENST00000541449 943 ntBASIC4.84□□□□□ -1.63
PAX9P55771 AC008055.1-201ENST00000547032 609 ntBASIC4.84□□□□□ -1.63
PAX9P55771 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 AL136520.1-202ENST00000555494 763 ntBASIC4.84□□□□□ -1.63
PAX9P55771 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 AC007346.2-201ENST00000564816 892 ntBASIC4.84□□□□□ -1.63
PAX9P55771 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 MTND4LP25-201ENST00000570218 163 ntBASIC4.84□□□□□ -1.63
PAX9P55771 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.84□□□□□ -1.63
PAX9P55771 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.84□□□□□ -1.63
PAX9P55771 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.84□□□□□ -1.63
PAX9P55771 AL133481.2-203ENST00000607558 139 ntBASIC4.84□□□□□ -1.63
PAX9P55771 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 AC084036.1-201ENST00000609190 508 ntBASIC4.84□□□□□ -1.63
PAX9P55771 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 MIR6070-201ENST00000613967 103 ntBASIC4.84□□□□□ -1.63
PAX9P55771 AC015712.7-201ENST00000615211 635 ntBASIC4.84□□□□□ -1.63
PAX9P55771 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.84□□□□□ -1.63
PAX9P55771 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
PAX9P55771 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
PAX9P55771 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PAX9P55771 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PAX9P55771 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.84□□□□□ -1.64
PAX9P55771 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.84□□□□□ -1.64
PAX9P55771 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.83□□□□□ -1.64
PAX9P55771 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.83□□□□□ -1.64
PAX9P55771 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
PAX9P55771 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.83□□□□□ -1.64
PAX9P55771 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PAX9P55771 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PAX9P55771 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 AP005435.3-201ENST00000531260 3198 ntBASIC4.83□□□□□ -1.64
PAX9P55771 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PAX9P55771 SNORA27.3-201ENST00000364937 134 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms