Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 TMEM161BP1-201ENST00000457388 1457 ntBASIC8.32□□□□□ -1.08
RXRBP28702 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 AC011008.2-201ENST00000624866 3352 ntBASIC8.31□□□□□ -1.08
RXRBP28702 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
RXRBP28702 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.31□□□□□ -1.08
RXRBP28702 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
RXRBP28702 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.31□□□□□ -1.08
RXRBP28702 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.31□□□□□ -1.08
RXRBP28702 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 RNU6-819P-201ENST00000364116 107 ntBASIC8.31□□□□□ -1.08
RXRBP28702 RNU6-609P-201ENST00000365459 107 ntBASIC8.31□□□□□ -1.08
RXRBP28702 SNORD116-4-201ENST00000384733 96 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AL138880.1-201ENST00000405824 642 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AL024507.1-201ENST00000412741 274 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AL158827.1-201ENST00000416300 391 ntBASIC8.31□□□□□ -1.08
RXRBP28702 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC8.31□□□□□ -1.08
RXRBP28702 AC073648.4-201ENST00000442655 781 ntBASIC8.31□□□□□ -1.08
RXRBP28702 Z80107.2-201ENST00000445127 392 ntBASIC8.31□□□□□ -1.08
RXRBP28702 ELOCP30-201ENST00000447108 299 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AC022206.1-201ENST00000495947 347 ntBASIC8.31□□□□□ -1.08
RXRBP28702 MORF4L2P1-201ENST00000503761 858 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AP001960.1-201ENST00000506494 658 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.31□□□□□ -1.08
RXRBP28702 NRON-201ENST00000517270 370 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AC104115.2-201ENST00000523026 687 ntBASIC8.31□□□□□ -1.08
RXRBP28702 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.31□□□□□ -1.08
RXRBP28702 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.31□□□□□ -1.08
RXRBP28702 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC8.31□□□□□ -1.08
RXRBP28702 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC8.31□□□□□ -1.08
RXRBP28702 AL356986.1-201ENST00000604085 341 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AC010998.3-201ENST00000613871 631 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AC100827.5-201ENST00000615883 426 ntBASIC8.31□□□□□ -1.08
RXRBP28702 CYCSP41-201ENST00000616920 296 ntBASIC8.31□□□□□ -1.08
RXRBP28702 AC068880.4-201ENST00000623082 495 ntBASIC8.31□□□□□ -1.08
RXRBP28702 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.31□□□□□ -1.08
RXRBP28702 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.31□□□□□ -1.08
RXRBP28702 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 YES1P1-201ENST00000418510 1628 ntBASIC8.31□□□□□ -1.08
RXRBP28702 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 LINC02019-201ENST00000608605 2060 ntBASIC8.31□□□□□ -1.08
RXRBP28702 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RXRBP28702 AC027088.4-201ENST00000611559 1947 ntBASIC8.31□□□□□ -1.08
RXRBP28702 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.3□□□□□ -1.08
RXRBP28702 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.3□□□□□ -1.08
RXRBP28702 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.3□□□□□ -1.08
RXRBP28702 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.3□□□□□ -1.08
RXRBP28702 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RXRBP28702 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.3□□□□□ -1.08
RXRBP28702 RNA5SP333-201ENST00000363466 118 ntBASIC8.3□□□□□ -1.08
RXRBP28702 RNA5SP334-201ENST00000364825 118 ntBASIC8.3□□□□□ -1.08
RXRBP28702 MIR223-201ENST00000385204 110 ntBASIC8.3□□□□□ -1.08
RXRBP28702 PRELID1P2-201ENST00000407805 396 ntBASIC8.3□□□□□ -1.08
RXRBP28702 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC8.3□□□□□ -1.08
RXRBP28702 RPL35AP31-201ENST00000418340 337 ntBASIC8.3□□□□□ -1.08
RXRBP28702 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.3□□□□□ -1.08
RXRBP28702 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC8.3□□□□□ -1.08
RXRBP28702 CNOT7P2-201ENST00000441051 832 ntBASIC8.3□□□□□ -1.08
RXRBP28702 MTCYBP21-201ENST00000443300 1113 ntBASIC8.3□□□□□ -1.08
RXRBP28702 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.3□□□□□ -1.08
RXRBP28702 TRIM60P16-201ENST00000444048 694 ntBASIC8.3□□□□□ -1.08
RXRBP28702 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 AC096922.1-201ENST00000461635 651 ntBASIC8.3□□□□□ -1.08
RXRBP28702 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC8.3□□□□□ -1.08
RXRBP28702 VTA1P2-201ENST00000520205 911 ntBASIC8.3□□□□□ -1.08
RXRBP28702 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.3□□□□□ -1.08
RXRBP28702 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC8.3□□□□□ -1.08
RXRBP28702 AC106730.2-201ENST00000566641 540 ntBASIC8.3□□□□□ -1.08
RXRBP28702 AC018638.7-201ENST00000605836 1114 ntBASIC8.3□□□□□ -1.08
RXRBP28702 AC135507.1-201ENST00000607214 561 ntBASIC8.3□□□□□ -1.08
RXRBP28702 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.3□□□□□ -1.08
RXRBP28702 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms