Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 PARP4P2-201ENST00000446672 3326 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 MAPK10-338ENST00000641647 3362 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC125336.1-201ENST00000508893 2827 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 OR10R3P-201ENST00000361688 942 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 RN7SKP187-201ENST00000365536 330 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC079809.1-201ENST00000415468 276 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC023271.1-201ENST00000445936 1090 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 CFL1P4-201ENST00000451536 498 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 RBBP4P1-201ENST00000502424 1276 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 MORF4L2P1-201ENST00000503761 858 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 OR4A42P-201ENST00000531397 938 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC006512.2-201ENST00000543250 486 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC073333.2-201ENST00000603589 769 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC245014.3-201ENST00000618589 347 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AL157762.1-201ENST00000619612 415 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 QRSL1P1-201ENST00000400977 1540 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AL161756.3-201ENST00000641216 2071 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 AC119674.1-202ENST00000641333 1860 ntBASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAPPC4Q9Y296 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AP001029.2-203ENST00000589795 4910 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 COX6B1P3-201ENST00000312310 260 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 NMD3P2-201ENST00000421815 761 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC007679.3-201ENST00000434035 414 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 RPS10P18-201ENST00000442662 495 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AL445466.1-201ENST00000448432 357 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC005077.1-201ENST00000449226 375 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 RSU1P1-201ENST00000453416 441 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 PPIAP27-201ENST00000453800 265 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC023194.2-201ENST00000465398 406 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC023245.1-201ENST00000468501 517 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC098847.1-201ENST00000473094 348 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 LSM3P4-201ENST00000502948 309 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 RNA5SP230-201ENST00000517039 122 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AP003396.4-201ENST00000527574 265 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 RPA2P1-201ENST00000556557 721 ntBASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.4□□□□□ -1.54
TRAPPC4Q9Y296 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms