Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PSG4-202ENST00000405312 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RPL15-210ENST00000456530 2835 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 EVL-203ENST00000544450 3704 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 DLG1-215ENST00000448528 2977 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 MYO7A-211ENST00000620575 4016 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 KLHDC4-205ENST00000446344 4444 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ANKRD26P1-201ENST00000566201 3921 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 OPRM1-209ENST00000435918 2217 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 IDH3A-201ENST00000299518 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 CHRNB3-201ENST00000289957 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC092145.1-201ENST00000564809 2434 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 MIR3142HG-201ENST00000517927 2301 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 POM121B-201ENST00000380760 2487 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 PGCP1-202ENST00000436252 1358 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC020915.6-201ENST00000637233 3042 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 PNPLA4-201ENST00000381042 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 SULF2-211ENST00000484875 4238 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 TRPV5-201ENST00000265310 2952 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 RNU12-201ENST00000362512 150 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 Y_RNA.179-201ENST00000363844 90 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 MIR487A-201ENST00000385009 80 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 SNORD88B-201ENST00000408454 91 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 LYG2-203ENST00000409679 878 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AL121748.1-201ENST00000414308 552 ntTSL 3 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 APRT-202ENST00000426324 664 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF823-203ENST00000440527 550 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC004224.1-201ENST00000459875 568 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL672P-201ENST00000474091 317 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 GAPDHP38-201ENST00000503632 1002 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 MRPL49P1-201ENST00000505951 535 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL353P-201ENST00000579902 252 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 IGHV1OR15-6-201ENST00000603166 343 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 AL137843.1-201ENST00000605078 385 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 U6.115-201ENST00000636045 103 ntBASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 RHD-210ENST00000622561 3007 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP3-3Q9BYR6 THPO-201ENST00000204615 1855 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms