Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.76□□□□□ -1.33
CCNA1P78396 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.76□□□□□ -1.33
CCNA1P78396 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.76□□□□□ -1.33
CCNA1P78396 AC079776.5-201ENST00000641920 211 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CCNA1P78396 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
CCNA1P78396 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC112243.1-201ENST00000623949 3851 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 U3.7-201ENST00000363668 216 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 SNORA74A-201ENST00000364089 198 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 MYL6P5-201ENST00000412707 459 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 AC017078.1-201ENST00000416146 368 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.75□□□□□ -1.33
CCNA1P78396 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC005297.1-201ENST00000444765 862 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
CCNA1P78396 RN7SL799P-201ENST00000475891 298 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.75□□□□□ -1.33
CCNA1P78396 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.75□□□□□ -1.33
CCNA1P78396 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC092944.2-201ENST00000605443 889 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 MIR6730-201ENST00000622213 67 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC021766.1-201ENST00000624404 741 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 AC004808.2-201ENST00000627965 773 ntBASIC6.75□□□□□ -1.33
CCNA1P78396 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.75□□□□□ -1.33
CCNA1P78396 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCNA1P78396 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCNA1P78396 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCNA1P78396 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCNA1P78396 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.74□□□□□ -1.33
CCNA1P78396 AL391261.1-201ENST00000555712 1479 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
CCNA1P78396 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCNA1P78396 AC005034.3-201ENST00000604845 1747 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.74□□□□□ -1.33
CCNA1P78396 RNA5SP211-201ENST00000365516 117 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 RNU4-34P-201ENST00000410431 124 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 OR6E1P-201ENST00000414424 923 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.74□□□□□ -1.33
CCNA1P78396 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.74□□□□□ -1.33
CCNA1P78396 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.74□□□□□ -1.33
CCNA1P78396 RN7SL72P-201ENST00000460697 269 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 AC008410.1-201ENST00000483777 339 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 RN7SL184P-201ENST00000488308 297 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 AC096754.1-201ENST00000508904 818 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.74□□□□□ -1.33
CCNA1P78396 SCARNA6.1-201ENST00000516989 238 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.74□□□□□ -1.33
CCNA1P78396 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.74□□□□□ -1.33
CCNA1P78396 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.74□□□□□ -1.33
CCNA1P78396 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.74□□□□□ -1.33
CCNA1P78396 TXNP4-201ENST00000575018 310 ntBASIC6.74□□□□□ -1.33
CCNA1P78396 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.74□□□□□ -1.33
CCNA1P78396 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CCNA1P78396 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.74□□□□□ -1.33
CCNA1P78396 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.74□□□□□ -1.33
CCNA1P78396 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
CCNA1P78396 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.74□□□□□ -1.33
CCNA1P78396 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCNA1P78396 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCNA1P78396 AC120036.2-201ENST00000509729 1474 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.73□□□□□ -1.33
CCNA1P78396 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 CASC19-248ENST00000641674 1356 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AC022905.1-201ENST00000503430 3048 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AC020656.2-201ENST00000613291 5309 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.73□□□□□ -1.33
CCNA1P78396 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 RN7SKP59-201ENST00000410520 314 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.73□□□□□ -1.33
CCNA1P78396 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.73□□□□□ -1.33
CCNA1P78396 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.73□□□□□ -1.33
CCNA1P78396 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms