Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 RN7SKP62-201ENST00000384539 329 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HOXD8P13378 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AK4P4-201ENST00000419465 646 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 EIF1P1-201ENST00000421436 341 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 GSTA6P-201ENST00000424144 582 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 ZNF863P-201ENST00000426746 417 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 GAPDHP37-201ENST00000442317 968 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 GAPDHP20-201ENST00000444107 1007 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 MTCYBP42-201ENST00000444653 1130 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC236972.4-201ENST00000458091 963 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 RPS7P10-201ENST00000464254 603 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 RPL9P33-201ENST00000484311 566 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC138853.1-201ENST00000503549 823 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC087683.1-201ENST00000591187 441 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC020914.7-201ENST00000594477 545 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AP004372.1-201ENST00000604842 844 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AL590032.1-201ENST00000604920 252 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC128687.1-201ENST00000605304 619 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AL390877.1-201ENST00000605704 214 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC068726.1-201ENST00000610993 341 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HOXD8P13378 AC026368.1-201ENST00000614934 690 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC005514.1-201ENST00000623521 208 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AC027559.1-201ENST00000636288 271 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 CASC19-232ENST00000641480 1244 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HOXD8P13378 AC007382.1-201ENST00000624376 2618 ntBASIC7.68□□□□□ -1.18
HOXD8P13378 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HOXD8P13378 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.68□□□□□ -1.18
HOXD8P13378 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.68□□□□□ -1.18
HOXD8P13378 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.68□□□□□ -1.18
HOXD8P13378 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
HOXD8P13378 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HOXD8P13378 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.67□□□□□ -1.18
HOXD8P13378 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.67□□□□□ -1.18
HOXD8P13378 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
HOXD8P13378 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.67□□□□□ -1.18
HOXD8P13378 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HOXD8P13378 RN7SKP47-201ENST00000365347 328 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.67□□□□□ -1.18
HOXD8P13378 UBBP1-201ENST00000392399 473 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AL031577.2-201ENST00000404133 280 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.67□□□□□ -1.18
HOXD8P13378 RN7SKP142-201ENST00000411236 328 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.67□□□□□ -1.18
HOXD8P13378 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AC098614.3-201ENST00000438957 440 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 RBMX2P4-201ENST00000441256 376 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.67□□□□□ -1.18
HOXD8P13378 AL358876.1-201ENST00000453364 1075 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.67□□□□□ -1.18
HOXD8P13378 AKR1D1P1-201ENST00000457236 936 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.67□□□□□ -1.18
HOXD8P13378 RN7SL870P-201ENST00000460111 296 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AC026348.1-201ENST00000462549 1053 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.67□□□□□ -1.18
HOXD8P13378 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.67□□□□□ -1.18
HOXD8P13378 RPS6P4-201ENST00000494693 758 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.67□□□□□ -1.18
HOXD8P13378 AC055733.3-201ENST00000505214 523 ntBASIC7.67□□□□□ -1.18
HOXD8P13378 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.67□□□□□ -1.18
HOXD8P13378 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.67□□□□□ -1.18
HOXD8P13378 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.67□□□□□ -1.18
HOXD8P13378 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms