Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 EIF2S2P4-201ENST00000461070 984 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 H3F3AP5-201ENST00000475267 429 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AC105420.1-201ENST00000504389 582 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AC016550.1-201ENST00000505348 785 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 AC010468.3-201ENST00000508225 458 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXN3O00409 ZNF519P4-201ENST00000514008 125 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 MRPS5P3-201ENST00000515577 166 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 RNA5SP434-201ENST00000516647 121 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 TPM3P3-201ENST00000521343 354 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXN3O00409 AP001000.1-201ENST00000526843 742 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 AC015922.4-201ENST00000612568 690 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 AC010325.3-201ENST00000641084 394 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 AL731532.1-201ENST00000623972 4236 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 DDX18P6-201ENST00000450119 1997 ntBASIC6.58□□□□□ -1.36
FOXN3O00409 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXN3O00409 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXN3O00409 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 AC022164.1-201ENST00000568767 2673 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXN3O00409 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 OR56A4-201ENST00000330728 1209 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 RNA5SP514-201ENST00000363717 111 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 RNU6-1176P-201ENST00000390955 107 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 PTCD2P2-201ENST00000415579 1095 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 Z82198.3-201ENST00000421145 199 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 MTND2P9-201ENST00000422293 931 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 H3F3BP1-201ENST00000440551 403 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AL645936.1-201ENST00000441979 518 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC007000.2-201ENST00000442564 487 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC097359.1-201ENST00000447946 463 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXN3O00409 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 RN7SL552P-201ENST00000462094 276 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC128716.1-201ENST00000475129 166 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXN3O00409 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXN3O00409 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXN3O00409 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXN3O00409 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXN3O00409 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 AC093510.2-201ENST00000562820 896 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC106785.3-201ENST00000564064 847 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 AC005726.4-201ENST00000582858 458 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXN3O00409 BNIP3P39-201ENST00000601077 554 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC073333.2-201ENST00000603589 769 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC105148.1-201ENST00000604961 409 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 HTR1DP1-201ENST00000616500 888 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 AL133370.2-201ENST00000619934 439 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 AC097372.4-201ENST00000625025 466 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 AL590396.2-201ENST00000636511 1041 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
FOXN3O00409 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXN3O00409 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
FOXN3O00409 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXN3O00409 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 AC093909.5-201ENST00000621839 1799 ntBASIC6.57□□□□□ -1.36
FOXN3O00409 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXN3O00409 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXN3O00409 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXN3O00409 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
FOXN3O00409 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms