Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 MIR141-201ENST00000384975 95 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 MIR223-201ENST00000385204 110 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 RNA5SP339-201ENST00000390987 122 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AL445687.2-201ENST00000458156 728 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC087360.1-201ENST00000518788 616 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 MIR4311-201ENST00000580794 100 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC008115.3-201ENST00000614874 549 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 SNORA70H-201ENST00000383910 135 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 SNORA70J-201ENST00000384182 135 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 AL139128.1-201ENST00000413921 941 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 AC073410.1-201ENST00000435125 589 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 Z80107.2-201ENST00000445127 392 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 RPSAP50-201ENST00000481955 852 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 MIR2117-201ENST00000516780 80 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 HNRNPCP1-201ENST00000556181 766 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 MIR4436B2-201ENST00000581415 91 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 MIR4436B1-201ENST00000583272 91 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 AL121612.2-201ENST00000612261 482 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 AC025574.2-201ENST00000615621 514 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 AC005840.5-201ENST00000619166 599 ntBASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 MVP-219ENST00000629059 120 ntTSL 5 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHANK2Q9UPX8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MAPK10-371ENST00000641952 5209 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MFSD8-239ENST00000641590 2479 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 RN7SKP213-201ENST00000410746 298 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms