Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRF2Q9HAW0 AC073365.1-203ENST00000641055 1992 ntBASIC5.89□□□□□ -1.47
BRF2Q9HAW0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRF2Q9HAW0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.89□□□□□ -1.47
BRF2Q9HAW0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRF2Q9HAW0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRF2Q9HAW0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.89□□□□□ -1.47
BRF2Q9HAW0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC016583.1-201ENST00000624221 2431 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC005725.1-201ENST00000577346 2607 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC107977.1-201ENST00000355745 939 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 SNORD1C-201ENST00000363315 78 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 PSMA6P1-201ENST00000400275 741 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 RNA5SP198-201ENST00000410376 127 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 PTCD2P2-201ENST00000415579 1095 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC245884.2-201ENST00000426257 404 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC013403.1-201ENST00000436954 263 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 H3F3BP1-201ENST00000440551 403 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AL645936.1-201ENST00000441979 518 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC099670.1-201ENST00000455141 783 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC004890.1-201ENST00000461005 181 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 RPL23AP40-201ENST00000487630 390 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 SNRPCP11-201ENST00000492453 205 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC095052.1-201ENST00000509955 863 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 RNU2-45P-201ENST00000516068 187 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC067904.2-201ENST00000517322 1283 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 TPM3P3-201ENST00000521343 354 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AL049779.3-201ENST00000557141 606 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC005632.2-201ENST00000564271 828 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC005972.3-201ENST00000606304 481 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 RN7SL261P-201ENST00000613441 282 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AL138693.1-201ENST00000622219 129 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC019080.5-201ENST00000624891 757 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AP000550.3-201ENST00000637734 379 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 TTC41P-205ENST00000551270 3963 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 AC024341.1-201ENST00000526444 1552 ntBASIC5.88□□□□□ -1.47
BRF2Q9HAW0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRF2Q9HAW0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 PROS2P-201ENST00000474651 1951 ntBASIC5.87□□□□□ -1.47
BRF2Q9HAW0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRF2Q9HAW0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms