Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 XKRYP5-201ENST00000449659 483 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AP002884.1-201ENST00000479691 655 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC010376.1-201ENST00000522101 334 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AL049870.4-201ENST00000555741 486 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC079315.1-201ENST00000602952 623 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 OR8G7P-201ENST00000616658 848 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AP001052.1-201ENST00000626421 99 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC073365.1-203ENST00000641055 1992 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC079949.2-201ENST00000617117 2933 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 MRPS6P2-201ENST00000381143 370 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 RNU4-74P-201ENST00000411280 161 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 HYALP1-201ENST00000417674 1279 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC115285.1-201ENST00000424879 736 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC099782.1-201ENST00000425889 474 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC093716.1-201ENST00000435923 377 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 CBX1P5-201ENST00000475330 559 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 H3F3AP3-201ENST00000497682 407 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 RBBP4P1-201ENST00000502424 1276 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 CIR1P1-201ENST00000524055 1133 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 OR7E13P-201ENST00000526052 910 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 OR8X1P-201ENST00000534542 869 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC090666.1-201ENST00000578241 445 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 SYPL1P2-201ENST00000582878 727 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC025175.1-201ENST00000606482 759 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC091768.1-201ENST00000609258 930 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC090506.2-201ENST00000624521 419 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 RACGAP1P-201ENST00000550663 1879 ntBASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC144BQ3MJ40 AC106754.1-201ENST00000562632 1513 ntBASIC7.52□□□□□ -1.2
CCDC144BQ3MJ40 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
CCDC144BQ3MJ40 HSPD1P11-201ENST00000508643 1702 ntBASIC7.52□□□□□ -1.2
CCDC144BQ3MJ40 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CASC19-281ENST00000642118 1554 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms