Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.55□□□□□ -1.36
NEK3P51956 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 RNA5SP77-201ENST00000365394 120 ntBASIC6.55□□□□□ -1.36
NEK3P51956 RN7SKP187-201ENST00000365536 330 ntBASIC6.55□□□□□ -1.36
NEK3P51956 LCN1P2-201ENST00000372030 223 ntBASIC6.55□□□□□ -1.36
NEK3P51956 MT-TP-201ENST00000387461 68 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AC104297.1-201ENST00000393779 870 ntBASIC6.55□□□□□ -1.36
NEK3P51956 RN7SKP161-201ENST00000411110 305 ntBASIC6.55□□□□□ -1.36
NEK3P51956 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.55□□□□□ -1.36
NEK3P51956 AC006065.1-201ENST00000422539 802 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AKR1B10P1-201ENST00000425765 942 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 AC023512.1-201ENST00000444513 499 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 EEF1B2P3-201ENST00000447718 678 ntBASIC6.55□□□□□ -1.36
NEK3P51956 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 H3F3AP5-201ENST00000475267 429 ntBASIC6.55□□□□□ -1.36
NEK3P51956 MARK2P8-201ENST00000476069 952 ntBASIC6.55□□□□□ -1.36
NEK3P51956 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.55□□□□□ -1.36
NEK3P51956 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.55□□□□□ -1.36
NEK3P51956 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.55□□□□□ -1.36
NEK3P51956 IGHV1-14-201ENST00000523391 241 ntBASIC6.55□□□□□ -1.36
NEK3P51956 OR4A46P-201ENST00000527255 933 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.55□□□□□ -1.36
NEK3P51956 OR4A6P-201ENST00000534364 970 ntBASIC6.55□□□□□ -1.36
NEK3P51956 OSBPL9P3-201ENST00000534523 595 ntBASIC6.55□□□□□ -1.36
NEK3P51956 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 AC023968.1-201ENST00000560719 475 ntBASIC6.55□□□□□ -1.36
NEK3P51956 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NEK3P51956 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.55□□□□□ -1.36
NEK3P51956 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 AC024589.2-201ENST00000605642 1294 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AC120053.1-201ENST00000607706 736 ntBASIC6.55□□□□□ -1.36
NEK3P51956 MIR7109-201ENST00000613748 65 ntBASIC6.55□□□□□ -1.36
NEK3P51956 AL138960.1-201ENST00000613838 513 ntBASIC6.55□□□□□ -1.36
NEK3P51956 MIR6085-201ENST00000618314 110 ntBASIC6.55□□□□□ -1.36
NEK3P51956 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NEK3P51956 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.55□□□□□ -1.36
NEK3P51956 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
NEK3P51956 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.55□□□□□ -1.36
NEK3P51956 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 UGT2B26P-201ENST00000508672 1613 ntBASIC6.54□□□□□ -1.36
NEK3P51956 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 RPL31P11-201ENST00000426558 1558 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.54□□□□□ -1.36
NEK3P51956 RNA5SP232-201ENST00000364144 119 ntBASIC6.54□□□□□ -1.36
NEK3P51956 RNU6-650P-201ENST00000365658 111 ntBASIC6.54□□□□□ -1.36
NEK3P51956 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NEK3P51956 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 TAF9BP2-201ENST00000400856 499 ntBASIC6.54□□□□□ -1.36
NEK3P51956 PTGES3P2-201ENST00000407942 482 ntBASIC6.54□□□□□ -1.36
NEK3P51956 RN7SKP86-201ENST00000410454 332 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AC003989.1-201ENST00000434569 565 ntBASIC6.54□□□□□ -1.36
NEK3P51956 RPL6P30-201ENST00000443382 862 ntBASIC6.54□□□□□ -1.36
NEK3P51956 COX4I1P2-201ENST00000447446 547 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AC236972.4-201ENST00000458091 963 ntBASIC6.54□□□□□ -1.36
NEK3P51956 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.54□□□□□ -1.36
NEK3P51956 OR9A1P-202ENST00000484361 945 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AC106822.1-201ENST00000502647 526 ntBASIC6.54□□□□□ -1.36
NEK3P51956 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 AC113367.2-201ENST00000505749 160 ntBASIC6.54□□□□□ -1.36
NEK3P51956 HMGN1P16-201ENST00000508308 283 ntBASIC6.54□□□□□ -1.36
NEK3P51956 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.54□□□□□ -1.36
NEK3P51956 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 CYCSP25-201ENST00000525280 316 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AP001804.1-201ENST00000526868 919 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AL133399.1-201ENST00000527476 298 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms