Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SCARNA1-201ENST00000517138 166 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.32□□□□□ -1.24
CNGA1P29973 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CNGA1P29973 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.32□□□□□ -1.24
CNGA1P29973 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.32□□□□□ -1.24
CNGA1P29973 AC015818.6-201ENST00000584274 634 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 AC067838.1-201ENST00000606064 577 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 FAM27E2-201ENST00000619668 403 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 MIR6886-201ENST00000619864 61 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AC024884.1-201ENST00000620583 399 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AC009269.6-201ENST00000621778 588 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AC018659.2-201ENST00000624690 715 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 AC103703.1-201ENST00000634783 663 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 SNX18P3-202ENST00000565670 1750 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.32□□□□□ -1.24
CNGA1P29973 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.32□□□□□ -1.24
CNGA1P29973 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CNGA1P29973 AC007485.2-201ENST00000623493 1667 ntBASIC7.32□□□□□ -1.24
CNGA1P29973 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 AL136531.3-201ENST00000624378 3658 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 AC010132.2-201ENST00000295493 1043 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CNGA1P29973 MTHFD2P5-201ENST00000320415 844 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CNGA1P29973 RNU6-316P-201ENST00000391027 107 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 RSL24D1P1-201ENST00000404972 493 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 RN7SKP281-201ENST00000410472 352 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC096537.2-201ENST00000413707 714 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 MTND4LP17-201ENST00000414607 293 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 MTCO2P1-201ENST00000424648 477 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.31□□□□□ -1.24
CNGA1P29973 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.31□□□□□ -1.24
CNGA1P29973 MOB1AP2-201ENST00000446060 614 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC021087.2-201ENST00000504656 1203 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AC095052.1-201ENST00000509955 863 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.31□□□□□ -1.24
CNGA1P29973 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.31□□□□□ -1.24
CNGA1P29973 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.31□□□□□ -1.24
CNGA1P29973 AC007346.1-201ENST00000569208 867 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 OR1AB1P-201ENST00000585564 761 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 AC100767.2-201ENST00000604840 693 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AC092111.2-201ENST00000611627 1414 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AC109309.2-201ENST00000612597 332 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AC091305.2-201ENST00000624049 1576 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 AC105114.1-201ENST00000624795 1862 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 OR5AC4P-202ENST00000642086 985 ntBASIC7.31□□□□□ -1.24
CNGA1P29973 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.31□□□□□ -1.24
CNGA1P29973 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNGA1P29973 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
CNGA1P29973 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.31□□□□□ -1.24
CNGA1P29973 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CNGA1P29973 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.3□□□□□ -1.24
CNGA1P29973 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.3□□□□□ -1.24
CNGA1P29973 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.3□□□□□ -1.24
CNGA1P29973 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.3□□□□□ -1.24
CNGA1P29973 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 MTCO1P4-201ENST00000520516 1409 ntBASIC7.3□□□□□ -1.24
CNGA1P29973 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNGA1P29973 OR13C3-201ENST00000374781 1108 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms