Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC034229.3-201ENST00000606203 2436 ntBASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC020633.1-201ENST00000468439 2247 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC016930.1-201ENST00000468766 2205 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ST13-201ENST00000216218 3595 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 NELL2-204ENST00000437801 3279 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC048338.1-201ENST00000535844 2748 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 WEE1-201ENST00000299613 3436 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 TPTE-204ENST00000618007 2150 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC073476.3-201ENST00000563949 2507 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC078880.4-201ENST00000617627 1749 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AL137145.1-201ENST00000391437 2447 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 EIF3C-202ENST00000395587 3137 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AL031577.1-201ENST00000339867 399 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RN7SKP292-201ENST00000365522 317 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 Y_RNA.368-201ENST00000365547 113 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RNU6-1293P-201ENST00000384077 107 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 MIR10A-201ENST00000385043 110 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RPL23AP17-201ENST00000401064 499 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AL023773.2-201ENST00000412173 1005 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC074117.2-201ENST00000417130 397 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC092017.2-201ENST00000427600 362 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RPL13AP5-201ENST00000439189 612 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 MTATP6P21-201ENST00000440681 189 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AL109613.1-205ENST00000446684 714 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AL157392.2-201ENST00000449462 474 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 HNRNPCP7-201ENST00000456056 905 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RNU7-141P-201ENST00000459304 62 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 APOA2-203ENST00000463812 401 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RN7SL704P-201ENST00000478699 274 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC005921.1-201ENST00000510589 286 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 MEG3-223ENST00000524131 721 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC068339.1-201ENST00000526965 141 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC064799.2-201ENST00000562681 698 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC107990.1-201ENST00000590415 489 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC104532.2-201ENST00000591109 589 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC008770.1-208ENST00000591838 430 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC027348.1-201ENST00000615979 615 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 Metazoa_SRP.151-201ENST00000616313 273 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RNU6-156P-201ENST00000621869 107 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC116348.4-201ENST00000624127 348 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC073264.4-201ENST00000638055 623 ntBASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PAX9-201ENST00000361487 4514 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC055717.1-201ENST00000502221 1986 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 TCF21-201ENST00000237316 3010 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 SH2D4A-201ENST00000265807 3352 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PCDHB12-201ENST00000239450 3853 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms