Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.82□□□□□ -1.48
LSMEM1Q8N8F7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 SNORD35A-201ENST00000363389 86 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RNU1-59P-201ENST00000364829 162 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 MTND3P20-201ENST00000407663 186 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RN7SKP221-201ENST00000410420 301 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RPS26P38-201ENST00000414476 348 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RPA2P2-201ENST00000419698 796 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 GNG5P5-201ENST00000420444 220 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC234771.4-201ENST00000441416 730 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 HMGN1P32-201ENST00000441744 256 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 GAPDHP37-201ENST00000442317 968 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC245517.2-201ENST00000442890 346 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC092967.1-201ENST00000449016 481 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RPL31P11-202ENST00000454082 372 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 Z83838.1-202ENST00000456225 839 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AP003385.3-201ENST00000472498 287 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC010343.2-201ENST00000510162 224 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC133552.4-201ENST00000576103 676 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC068408.1-201ENST00000577406 1144 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AC135803.1-201ENST00000608748 565 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 U1.25-201ENST00000614085 162 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 AL121890.2-201ENST00000617644 465 ntBASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.81□□□□□ -1.48
LSMEM1Q8N8F7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 GUCY1B2-204ENST00000531898 1979 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 PARP4P2-201ENST00000446672 3326 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 RN7SKP237-201ENST00000364663 301 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 SNORA7A-201ENST00000384765 139 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 VIM2P-201ENST00000402383 1294 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 RPS17P17-201ENST00000419392 409 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC006509.1-201ENST00000420788 634 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 MTND2P2-201ENST00000434633 945 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AL645939.3-201ENST00000435408 225 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AL157827.1-201ENST00000447622 132 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 NPM1P39-201ENST00000449818 867 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC103563.5-201ENST00000455643 364 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 RN7SL790P-201ENST00000474043 298 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 AC020779.1-201ENST00000478757 796 ntBASIC5.8□□□□□ -1.48
LSMEM1Q8N8F7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms