Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC6A4P31645 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SLC6A4P31645 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.47□□□□□ -1.37
SLC6A4P31645 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SLC6A4P31645 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC027334.1-201ENST00000603257 310 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC008759.3-201ENST00000613300 508 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AP003486.1-201ENST00000525716 3994 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC6A4P31645 IFIT1P1-201ENST00000400497 1449 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC6A4P31645 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC6A4P31645 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
SLC6A4P31645 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.47□□□□□ -1.37
SLC6A4P31645 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC110373.1-201ENST00000505994 3505 ntBASIC6.46□□□□□ -1.37
SLC6A4P31645 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SLC6A4P31645 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SLC6A4P31645 AC112243.1-201ENST00000623949 3851 ntBASIC6.46□□□□□ -1.37
SLC6A4P31645 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.46□□□□□ -1.37
SLC6A4P31645 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 OR2AH1P-202ENST00000641232 2744 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SLC6A4P31645 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 MIR365B-201ENST00000362317 111 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 RNA5SP350-201ENST00000363298 111 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 RNU1-49P-201ENST00000363468 159 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 RNA5SP478-201ENST00000364657 115 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC6A4P31645 OR7E156P-201ENST00000400303 464 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 ST13P16-201ENST00000401760 781 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 RNA5SP115-201ENST00000411160 107 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AL024507.1-201ENST00000412741 274 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC6A4P31645 RPL7AP14-201ENST00000424041 802 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AC092447.3-201ENST00000426027 686 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 USP12PY-201ENST00000427677 1064 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC6A4P31645 MTCO1P45-201ENST00000431457 267 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 PSMD10P2-201ENST00000432890 672 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 MTND2P21-201ENST00000436242 1042 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 MORF4-201ENST00000447135 971 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC144530.1-201ENST00000452862 555 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 VPS25P1-201ENST00000455691 508 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 DUXAP8-207ENST00000456786 622 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AP002884.1-201ENST00000479691 655 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 RPS3AP6-201ENST00000484430 795 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 MTND6P8-201ENST00000503471 522 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC010343.2-201ENST00000510162 224 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC6A4P31645 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 MTCO3P27-201ENST00000514397 196 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 RN7SKP35-201ENST00000517210 151 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC6A4P31645 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.46□□□□□ -1.38
SLC6A4P31645 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 AL049838.1-201ENST00000563647 981 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC002519.2-203ENST00000567043 837 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 AP001033.2-201ENST00000609701 1003 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 DUXAP10-204ENST00000612052 616 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 MIR6071-201ENST00000616741 78 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SLC6A4P31645 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 AL645568.2-201ENST00000432815 1337 ntBASIC6.46□□□□□ -1.38
SLC6A4P31645 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
SLC6A4P31645 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC6A4P31645 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC6A4P31645 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC6A4P31645 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC6A4P31645 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC6A4P31645 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.45□□□□□ -1.38
SLC6A4P31645 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC6A4P31645 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms