Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC073333.2-201ENST00000603589 769 ntBASIC5.99□□□□□ -1.45
CDH3P22223 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH3P22223 RN7SL261P-201ENST00000613441 282 ntBASIC5.99□□□□□ -1.45
CDH3P22223 RNA5SP439-201ENST00000617595 124 ntBASIC5.99□□□□□ -1.45
CDH3P22223 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH3P22223 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
CDH3P22223 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH3P22223 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CDH3P22223 AC007342.5-201ENST00000571340 2142 ntBASIC5.99□□□□□ -1.45
CDH3P22223 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH3P22223 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH3P22223 BIN2P1-201ENST00000504996 1530 ntBASIC5.99□□□□□ -1.45
CDH3P22223 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH3P22223 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH3P22223 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CDH3P22223 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH3P22223 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 PEX12P1-201ENST00000400284 1048 ntBASIC5.98□□□□□ -1.45
CDH3P22223 SNORA77.2-201ENST00000408571 112 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AL445213.1-201ENST00000412589 747 ntBASIC5.98□□□□□ -1.45
CDH3P22223 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH3P22223 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH3P22223 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH3P22223 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AC130360.1-201ENST00000425489 1117 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH3P22223 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH3P22223 PNKDP1-201ENST00000435914 430 ntBASIC5.98□□□□□ -1.45
CDH3P22223 CYCSP51-201ENST00000443545 318 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 AC098799.1-201ENST00000504752 800 ntBASIC5.98□□□□□ -1.45
CDH3P22223 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH3P22223 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 RN7SKP35-201ENST00000517210 151 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH3P22223 AC130365.2-201ENST00000525882 1201 ntBASIC5.98□□□□□ -1.45
CDH3P22223 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH3P22223 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH3P22223 MIR4701-201ENST00000583094 63 ntBASIC5.98□□□□□ -1.45
CDH3P22223 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH3P22223 AP001437.1-201ENST00000608783 456 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AP005212.4-201ENST00000614206 710 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AL512652.1-201ENST00000619006 500 ntBASIC5.98□□□□□ -1.45
CDH3P22223 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 LINC01616-201ENST00000561816 2280 ntBASIC5.98□□□□□ -1.45
CDH3P22223 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CDH3P22223 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH3P22223 AC018717.1-201ENST00000457712 1505 ntBASIC5.98□□□□□ -1.45
CDH3P22223 AP000473.2-201ENST00000602659 1537 ntBASIC5.98□□□□□ -1.45
CDH3P22223 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH3P22223 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH3P22223 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 AC015689.2-201ENST00000528172 1738 ntBASIC5.97□□□□□ -1.45
CDH3P22223 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 BRAFP1-201ENST00000445336 2703 ntBASIC5.97□□□□□ -1.45
CDH3P22223 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH3P22223 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH3P22223 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH3P22223 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH3P22223 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH3P22223 AC016908.1-201ENST00000442571 1219 ntBASIC5.97□□□□□ -1.45
CDH3P22223 AL157385.1-201ENST00000446973 268 ntBASIC5.97□□□□□ -1.45
CDH3P22223 AC097463.1-201ENST00000447288 481 ntBASIC5.97□□□□□ -1.45
CDH3P22223 AC002553.3-201ENST00000453002 341 ntBASIC5.97□□□□□ -1.45
CDH3P22223 RBBP4P1-201ENST00000502424 1276 ntBASIC5.97□□□□□ -1.45
CDH3P22223 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 AC008676.3-201ENST00000521237 435 ntBASIC5.97□□□□□ -1.45
CDH3P22223 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH3P22223 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 AC092332.1-201ENST00000563684 829 ntBASIC5.97□□□□□ -1.45
CDH3P22223 NDUFA5P11-201ENST00000567995 343 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms