Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 SNORA40.3-201ENST00000390964 122 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AL389915.1-201ENST00000422463 466 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 FABP7P1-201ENST00000424004 391 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AL353093.1-201ENST00000441292 436 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC007677.1-201ENST00000445757 515 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC073522.1-201ENST00000483312 377 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 LARP1BP2-201ENST00000486594 519 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 RPL5P33-201ENST00000487833 905 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL124P-201ENST00000498656 285 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 MTCO3P9-201ENST00000506989 781 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 DUTP7-201ENST00000507982 486 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 BTG4P1-201ENST00000510421 183 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC025260.1-201ENST00000548858 430 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 GTF2IP8-201ENST00000560687 584 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC091304.5-201ENST00000568969 158 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL237P-201ENST00000580912 287 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AP001004.1-201ENST00000582468 324 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AL359880.1-201ENST00000621879 266 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 MIR6863-201ENST00000636112 90 ntBASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC036108.4-201ENST00000611654 2516 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 RNU5D-1-201ENST00000363299 116 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 RNU6-1263P-201ENST00000384601 106 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 MTCYBP36-201ENST00000404146 440 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 HSPE1P16-201ENST00000426640 348 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 ELOCP14-201ENST00000428070 331 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 KCTD9P3-201ENST00000434597 1169 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 OSTCP2-201ENST00000437956 444 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 ELOCP7-201ENST00000439968 331 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC015983.1-201ENST00000441577 373 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 MTND4P19-201ENST00000446659 478 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC016489.1-201ENST00000461109 375 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL740P-201ENST00000467060 344 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 HMGN1P12-201ENST00000499125 195 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 PSMA2P2-201ENST00000504319 686 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 RPL7L1P4-201ENST00000513004 707 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 Y_RNA.701-201ENST00000516812 110 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 CDC42P3-201ENST00000518493 633 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 HNRNPCP8-201ENST00000528764 888 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 SERPINA15P-201ENST00000529287 266 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC087276.1-201ENST00000529659 480 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms