Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 OR7A8P-201ENST00000595427 913 ntBASIC6.22□□□□□ -1.41
YIPF1Q9Y548 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 AC004836.1-201ENST00000623032 634 ntBASIC6.22□□□□□ -1.41
YIPF1Q9Y548 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 OR11H2-202ENST00000641517 1085 ntBASIC6.22□□□□□ -1.41
YIPF1Q9Y548 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 AC107980.1-201ENST00000558671 3355 ntBASIC6.22□□□□□ -1.41
YIPF1Q9Y548 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 AL117378.2-201ENST00000622916 1337 ntBASIC6.22□□□□□ -1.41
YIPF1Q9Y548 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
YIPF1Q9Y548 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
YIPF1Q9Y548 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
YIPF1Q9Y548 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
YIPF1Q9Y548 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
YIPF1Q9Y548 AP001157.1-201ENST00000550837 2339 ntBASIC6.21□□□□□ -1.41
YIPF1Q9Y548 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
YIPF1Q9Y548 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.21□□□□□ -1.41
YIPF1Q9Y548 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 SNORA81-201ENST00000408493 178 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 RN7SKP29-201ENST00000410957 272 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC007562.1-201ENST00000421819 517 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC007568.1-201ENST00000422912 471 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC023274.2-201ENST00000445264 521 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 RPS23P6-201ENST00000466136 431 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AL136038.1-201ENST00000497246 351 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 RPL7L1P4-201ENST00000513004 707 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 RN7SKP98-201ENST00000517070 156 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC007494.1-201ENST00000562293 760 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 GARSP1-201ENST00000570895 719 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AL512624.1-201ENST00000613638 469 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC022467.1-201ENST00000614738 749 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC022960.2-201ENST00000616300 666 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 AC087565.3-203ENST00000641018 837 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 CIR1P2-201ENST00000514821 1342 ntBASIC6.21□□□□□ -1.42
YIPF1Q9Y548 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
YIPF1Q9Y548 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 RNA5SP394-201ENST00000364216 119 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AC240504.1-201ENST00000395709 845 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 RN7SKP151-201ENST00000410230 316 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 MYL6P5-201ENST00000412707 459 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AL121776.1-201ENST00000429337 372 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 RN7SL214P-201ENST00000487317 265 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 OR4A42P-201ENST00000531397 938 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 RN7SL544P-201ENST00000617232 284 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AL157762.1-201ENST00000619612 415 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 RN7SL763P-201ENST00000620922 284 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AC079753.1-201ENST00000623243 3868 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 AL353763.1-201ENST00000624467 1628 ntBASIC6.2□□□□□ -1.42
YIPF1Q9Y548 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YIPF1Q9Y548 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
YIPF1Q9Y548 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms